RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 ACY3Q96HD9 319 aa7.82□□□□□ -1.16
HLA-DQB1-206ENST00000443574 OR10C1Q96KK4 312 aa7.82□□□□□ -1.16
HLA-DQB1-206ENST00000443574 SPAG8Q99932 426 aaPredicted RBP7.82□□□□□ -1.16
HLA-DQB1-206ENST00000443574 FNDC4Q9H6D8 234 aaPredicted RBP7.82□□□□□ -1.16
HLA-DQB1-206ENST00000443574 GPN1Q9HCN4 374 aaPredicted RBP7.82□□□□□ -1.16
HLA-DQB1-206ENST00000443574 MLXQ9UH92 298 aa7.82□□□□□ -1.16
HLA-DQB1-206ENST00000443574 PUS1Q9Y606 427 aaKnown RBP eCLIP7.82□□□□□ -1.16
HLA-DQB1-206ENST00000443574 IGHV3OR16-8A0A075B7F1 116 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 IGHV7-4-1A0A0J9YVY3 117 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 A0A1W2PS18 150 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 IZUMO1RA6ND01 250 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 OR4C46A6NHA9 309 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 TMEM50AO95807 157 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 SCGB1D2O95969 90 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 EDN2P20800 178 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 OR10J1P30954 320 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 GPX4P36969 197 aaPredicted RBP7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 IAH1Q2TAA2 248 aaPredicted RBP7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 PRSS54Q6PEW0 395 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 ADAMTSL5Q6ZMM2 481 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 ZNF431Q8TF32 576 aaPredicted RBP7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 Q8WTZ3 238 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 WDR89Q96FK6 387 aaPredicted RBP7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 GRAMD2BQ96HH9 432 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 METTL26Q96S19 204 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 NEURL2Q9BR09 285 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 MAGT1Q9H0U3 335 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 TUBA4BQ9H853 241 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 TBC1D24Q9ULP9 559 aa7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 STRAPQ9Y3F4 350 aaKnown RBP7.81□□□□□ -1.16
HLA-DQB1-206ENST00000443574 A8MZ25 164 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 TSPAN4O14817 238 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 ZNF207O43670 478 aaKnown RBP7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 SSSCA1O60232 199 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 PRAF2O60831 178 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 SCAF4O95104 1147 aaKnown RBP7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 FRMD6-AS1P0C7T7 363 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 IGLC1P0CG04 106 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 IGHV4-30-4P0DP06 118 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 NUP62P37198 522 aaPredicted RBP7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 EIF2B2P49770 351 aaKnown RBP7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 YPEL3P61236 119 aaPredicted RBP7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 PAFAH1B2P68402 229 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 TOMM20LQ6UXN7 152 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 C12orf45Q8N5I9 185 aaPredicted RBP7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 SMPXQ9UHP9 88 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 PFDN2Q9UHV9 154 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 COL7A1Q02388 2944 aa7.8□□□□□ -1.16
HLA-DQB1-206ENST00000443574 C5orf51A6NDU8 294 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 ZFP92A6NM28 416 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 FAM25EA8MYX2 175 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 H3BP45 60 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 NPPCP23582 126 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 ID3Q02535 119 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 TIGITQ495A1 244 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 SPANXN5Q5MJ07 72 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 Q8N1Y9 231 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 ZBTB8BQ8NAP8 495 aaPredicted RBP7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 OR4D5Q8NGN0 318 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 TMEM170AQ8WVE7 144 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 NPIPB3Q92617 1050 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 RAB40CQ96S21 281 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 SEC22CQ9BRL7 303 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 RHPN1-AS1Q9BWJ2 59 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 ZMAT4Q9H898 229 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 GSKIPQ9P0R6 139 aa7.79□□□□□ -1.16
HLA-DQB1-206ENST00000443574 ZNF785A8K8V0 405 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 MPTX1A8MV57 137 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 OR11H12B2RN74 326 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 L7N2F9 121 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 CHEK1O14757 476 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 TOMM40O96008 361 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 IGKV1-17P01599 117 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 IL4P05112 153 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 IL5P05113 134 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 PVALBP20472 110 aaPredicted RBP7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 POLR2GP62487 172 aaKnown RBP eCLIP7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 VAMP2P63027 116 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 AKR1C1Q04828 323 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 C11orf87Q6NUJ2 197 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 GSG1LQ6UXU4 331 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 PSENENQ9NZ42 101 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 MRPL36Q9P0J6 103 aaKnown RBP7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 DNAH9Q9NYC9 4486 aa7.78□□□□□ -1.16
HLA-DQB1-206ENST00000443574 IGHV3-49A0A0A0MS15 119 aa7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 HELTA6NFD8 242 aa7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 CCSO14618 274 aa7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 TSC22D2O75157 780 aa7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 CFDP00746 253 aaPredicted RBP7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 HNRNPCP07910 306 aaKnown RBP eCLIP7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 CD7P09564 240 aa7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 RD3LP0DJH9 198 aa7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 S100A7P31151 101 aa7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 CMC4P56277 68 aaPredicted RBP7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 TAS2R30P59541 319 aa7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 RPL11P62913 178 aaKnown RBP7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 GAMTQ14353 236 aa7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 MLANAQ16655 118 aa7.77□□□□□ -1.17
HLA-DQB1-206ENST00000443574 TCF24Q7RTU0 167 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms