RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 MLANAQ16655 118 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 DEFB121Q5J5C9 76 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 LAMTOR1Q6IAA8 161 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 C11orf87Q6NUJ2 197 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 ADAMTSL5Q6ZMM2 481 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 GTSCR1Q86UQ5 136 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 HAPLN4Q86UW8 402 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 Q8WTZ3 238 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 NPIPB3Q92617 1050 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 ACY3Q96HD9 319 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 L7N2F9 121 aa8.2□□□□□ -1.1
HDAC6-211ENST00000443563 TSC22D2O75157 780 aa8.2□□□□□ -1.1
HDAC6-211ENST00000443563 SCAF4O95104 1147 aaKnown RBP8.2□□□□□ -1.1
HDAC6-211ENST00000443563 MBPP02686 304 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-211ENST00000443563 PVALBP20472 110 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-211ENST00000443563 YPEL3P61236 119 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-211ENST00000443563 VAMP2P63027 116 aa8.2□□□□□ -1.1
HDAC6-211ENST00000443563 CD300EQ496F6 205 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-211ENST00000443563 TOMM20LQ6UXN7 152 aa8.2□□□□□ -1.1
HDAC6-211ENST00000443563 RBPMS2Q6ZRY4 209 aaKnown RBP8.2□□□□□ -1.1
HDAC6-211ENST00000443563 NARS2Q96I59 477 aaKnown RBP8.2□□□□□ -1.1
HDAC6-211ENST00000443563 TMEM231Q9H6L2 316 aa8.2□□□□□ -1.1
HDAC6-211ENST00000443563 MRPL36Q9P0J6 103 aaKnown RBP8.2□□□□□ -1.1
HDAC6-211ENST00000443563 MLXQ9UH92 298 aa8.2□□□□□ -1.1
HDAC6-211ENST00000443563 PUS1Q9Y606 427 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC6-211ENST00000443563 TGP01266 2768 aa8.2□□□□□ -1.1
HDAC6-211ENST00000443563 IGHV7-4-1A0A0J9YVY3 117 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 H3BP45 60 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 SSNA1O43805 119 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 CD5P06127 495 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 IGLC1P0CG04 106 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 CYCSP99999 105 aaKnown RBP8.19□□□□□ -1.1
HDAC6-211ENST00000443563 GAMTQ14353 236 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 TIGITQ495A1 244 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 BTNL8Q6UX41 500 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 SMPXQ9UHP9 88 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 SMAD5-AS1Q9Y6J3 95 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 SORL1Q92673 2214 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 COL7A1Q02388 2944 aa8.19□□□□□ -1.1
HDAC6-211ENST00000443563 IGHV3OR16-8A0A075B7F1 116 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 A0A1W2PS18 150 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 ZFP92A6NM28 416 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 GOSR2O14653 212 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 ZNF207O43670 478 aaKnown RBP8.18□□□□□ -1.1
HDAC6-211ENST00000443563 TOMM40O96008 361 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 RLN2P04090 185 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 RD3LP0DJH9 198 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 EDN2P20800 178 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 NPPCP23582 126 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 PAX9P55771 341 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 GUCA2BQ16661 112 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 OR10P1Q8NGE3 313 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 METTL26Q96S19 204 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 NMES1Q9C002 83 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 PFDN2Q9UHV9 154 aa8.18□□□□□ -1.1
HDAC6-211ENST00000443563 RCL1Q9Y2P8 373 aaKnown RBP8.18□□□□□ -1.1
HDAC6-211ENST00000443563 LSM5Q9Y4Y9 91 aaKnown RBP8.18□□□□□ -1.1
HDAC6-211ENST00000443563 LSM4Q9Y4Z0 139 aaKnown RBP8.18□□□□□ -1.1
HDAC6-211ENST00000443563 C7orf66A4D0T2 115 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 IZUMO1RA6ND01 250 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 PRSS46E5RG02 174 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 FNDC10F2Z333 226 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 K7EPK0 472 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 CFDP00746 253 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-211ENST00000443563 S100A10P60903 97 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 OR8G2PQ6IF36 304 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 TMEM61Q8N0U2 210 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 OR51G1Q8NGK1 321 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 WDR89Q96FK6 387 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-211ENST00000443563 GRAMD2BQ96HH9 432 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 ZNF414Q96IQ9 312 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 TRGV9Q99603 122 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 SPAG8Q99932 426 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-211ENST00000443563 RHPN1-AS1Q9BWJ2 59 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 MGAT4CQ9UBM8 478 aa8.17□□□□□ -1.1
HDAC6-211ENST00000443563 DNAH9Q9NYC9 4486 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 ZNF785A8K8V0 405 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 CHEK1O14757 476 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 TSPAN4O14817 238 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 IL4P05112 153 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 HNRNPCP07910 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC6-211ENST00000443563 METTL15P1P0C7V9 234 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 CRYBB3P26998 211 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 NUP62P37198 522 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-211ENST00000443563 EIF2B2P49770 351 aaKnown RBP8.16□□□□□ -1.1
HDAC6-211ENST00000443563 BCAP31P51572 246 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 CD81P60033 236 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 PAFAH1B2P68402 229 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 DLK1P80370 383 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 AKR1C1Q04828 323 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 IL15RAQ13261 267 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 RAB32Q13637 225 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 RGS21Q2M5E4 152 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 ACOT7LQ6ZUV0 252 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 THAP8Q8NA92 274 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 NEURL2Q9BR09 285 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 GGACTQ9BVM4 153 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms