RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CARHSP1Q9Y2V2 147 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 F11RQ9Y624 299 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 LOC102723971A0A1B0GUV8 181 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 ZFP92A6NM28 416 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SEC14L6B5MCN3 397 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 FCN1O00602 326 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 APELAP0DMC3 54 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 ADCYAP1P18509 176 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 OR10J1P30954 320 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SSX7Q7RTT5 188 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 OR1L6Q8NGR2 347 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 ARPC1AQ92747 370 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SLC35B3Q9H1N7 401 aa11.47□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SH2D7A6NKC9 451 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 YIF1AO95070 293 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 NDUFA7O95182 113 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 MT-CO2P00403 227 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 BCL2P10415 239 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 DEFA4P12838 97 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 TAGLN2P37802 199 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 RHOBP62745 196 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 KHDC3LQ587J8 217 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 RXFP4Q8TDU9 374 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 RAB24Q969Q5 203 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 RASL11BQ9BPW5 248 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SLC25A33Q9BSK2 321 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 MANBALQ9NQG1 85 aa11.46□□□□□ -0.57
TNFRSF1A-204ENST00000440083 HMGB3O15347 200 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 HSPB1P04792 205 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SSBP2P81877 361 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 ICAM4Q14773 271 aa11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 C10orf91Q5T1B1 145 aa11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 C12orf54Q6X4T0 127 aa11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 Q6ZS46 218 aa11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 CYP2G1PQ6ZSU1 146 aa11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 OR4F5Q8NH21 305 aa11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 OR2T6Q8NHC8 308 aa11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 RARRES2Q99969 163 aa11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PITPNC1Q9UKF7 332 aa11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SLC45A2Q9UMX9 530 aa11.45□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PLXNB1O43157 2135 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 C9JQL5 133 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SCO1O75880 301 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SNAPINO95295 136 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PSMB3P49720 205 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 RND2P52198 227 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 RPL15P61313 204 aaKnown RBP11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 BLCAPP62952 87 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PRR20EP86478 221 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PRR20CP86479 221 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PRR20DP86480 221 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PRR20BP86481 221 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PRR20AP86496 221 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 FOXL1Q12952 345 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 MLANAQ16655 118 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 TMEM95Q3KNT9 176 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 GCSAMLQ5JQS6 135 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PVRIGQ6DKI7 326 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 ZNF562Q6V9R5 426 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 THAP8Q8NA92 274 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 LINC01006Q8NI28 216 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 NPIPB3Q92617 1050 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 RBM14Q96PK6 669 aaKnown RBP11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SCRT1Q9BWW7 348 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 NKX6-2Q9C056 277 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 FNDC4Q9H6D8 234 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 ZNF702PQ9H963 129 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 VAX2Q9UIW0 290 aa11.44□□□□□ -0.58
TNFRSF1A-204ENST00000440083 TCRBV4S1A1TA0A5B7 111 aa11.43□□□□□ -0.58
TNFRSF1A-204ENST00000440083 EIF3GO75821 320 aaKnown RBP eCLIP11.43□□□□□ -0.58
TNFRSF1A-204ENST00000440083 CXorf1O96002 111 aa11.43□□□□□ -0.58
TNFRSF1A-204ENST00000440083 AMY1AP04745 511 aa11.43□□□□□ -0.58
TNFRSF1A-204ENST00000440083 CEBPGP53567 150 aa11.43□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SELENOTP62341 195 aa11.43□□□□□ -0.58
TNFRSF1A-204ENST00000440083 CX3CL1P78423 397 aa11.43□□□□□ -0.58
TNFRSF1A-204ENST00000440083 Q8N9W7 124 aa11.43□□□□□ -0.58
TNFRSF1A-204ENST00000440083 NPFFR1Q9GZQ6 430 aa11.43□□□□□ -0.58
TNFRSF1A-204ENST00000440083 WNT10AQ9GZT5 417 aa11.43□□□□□ -0.58
TNFRSF1A-204ENST00000440083 CLPSL1A2RUU4 121 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 NPIPB5A8MRT5 1133 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 HLA-DRB1P01911 266 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SRP19P09132 144 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 CTRB1P17538 263 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 MFAP2P55001 183 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PMS2P11Q13670 270 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 GUCA2BQ16661 112 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SOHLH1Q5JUK2 328 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 CTRB2Q6GPI1 263 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 C19orf35Q6ZS72 473 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SLC35E3Q7Z769 313 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 OR1L4Q8NGR5 311 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SPATA3Q8NHX4 192 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 RNF2Q99496 336 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 FAM103A1Q9BTL3 118 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 MOB4Q9Y3A3 225 aa11.42□□□□□ -0.58
TNFRSF1A-204ENST00000440083 IGKV1OR2-108A0A075B7D4 117 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 COX7A2P2O60397 106 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 IGHV3-48P01763 117 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 CRYGCP07315 174 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 LINC00869P0C866 280 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms