RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 CORTO00230 105 aa12.4□□□□□ -0.42
APP-208ENST00000439274 MOSP00540 346 aa12.4□□□□□ -0.42
APP-208ENST00000439274 MFAP2P55001 183 aa12.4□□□□□ -0.42
APP-208ENST00000439274 ZNF841Q6ZN19 808 aa12.4□□□□□ -0.42
APP-208ENST00000439274 NUDT10Q8NFP7 164 aa12.4□□□□□ -0.42
APP-208ENST00000439274 TMEM167AQ8TBQ9 72 aa12.4□□□□□ -0.42
APP-208ENST00000439274 FXYD5Q96DB9 178 aa12.4□□□□□ -0.42
APP-208ENST00000439274 NUDT11Q96G61 164 aa12.4□□□□□ -0.42
APP-208ENST00000439274 RNF2Q99496 336 aa12.4□□□□□ -0.42
APP-208ENST00000439274 TCRBV4S1A1TA0A5B7 111 aa12.39□□□□□ -0.43
APP-208ENST00000439274 M0QZK8 103 aa12.39□□□□□ -0.43
APP-208ENST00000439274 SLC25A17O43808 307 aa12.39□□□□□ -0.43
APP-208ENST00000439274 FSTL3O95633 263 aa12.39□□□□□ -0.43
APP-208ENST00000439274 IGLV2-23P01705 113 aa12.39□□□□□ -0.43
APP-208ENST00000439274 C3orf79P0CE67 100 aa12.39□□□□□ -0.43
APP-208ENST00000439274 APELAP0DMC3 54 aa12.39□□□□□ -0.43
APP-208ENST00000439274 ADIPOQQ15848 244 aa12.39□□□□□ -0.43
APP-208ENST00000439274 SPATA45Q537H7 98 aa12.39□□□□□ -0.43
APP-208ENST00000439274 NUP35Q8NFH5 326 aa12.39□□□□□ -0.43
APP-208ENST00000439274 OR4C13Q8NGP0 309 aa12.39□□□□□ -0.43
APP-208ENST00000439274 WNT10AQ9GZT5 417 aa12.39□□□□□ -0.43
APP-208ENST00000439274 SAP30LQ9HAJ7 183 aa12.39□□□□□ -0.43
APP-208ENST00000439274 RIF1Q5UIP0 2472 aaKnown RBP12.39□□□□□ -0.43
APP-208ENST00000439274 IGHV3-72A0A0B4J1Y9 119 aa12.39□□□□□ -0.43
APP-208ENST00000439274 A0A1W2PN81 502 aa12.39□□□□□ -0.43
APP-208ENST00000439274 C17orf100A8MU93 164 aa12.39□□□□□ -0.43
APP-208ENST00000439274 CEACAM8P31997 349 aaPredicted RBP12.39□□□□□ -0.43
APP-208ENST00000439274 GPR6P46095 362 aaPredicted RBP12.39□□□□□ -0.43
APP-208ENST00000439274 COX19Q49B96 90 aa12.39□□□□□ -0.43
APP-208ENST00000439274 Q6ZS92 163 aa12.39□□□□□ -0.43
APP-208ENST00000439274 LINC00305Q7Z4B0 112 aa12.39□□□□□ -0.43
APP-208ENST00000439274 C18orf32Q8TCD1 76 aa12.39□□□□□ -0.43
APP-208ENST00000439274 BLNKQ8WV28 456 aa12.39□□□□□ -0.43
APP-208ENST00000439274 CCL17Q92583 94 aa12.39□□□□□ -0.43
APP-208ENST00000439274 MBD6Q96DN6 1003 aa12.39□□□□□ -0.43
APP-208ENST00000439274 SSBP4Q9BWG4 385 aaPredicted RBP12.39□□□□□ -0.43
APP-208ENST00000439274 FOSL1P15407 271 aa12.38□□□□□ -0.43
APP-208ENST00000439274 TNFRSF1AP19438 455 aa12.38□□□□□ -0.43
APP-208ENST00000439274 ORM2P19652 201 aa12.38□□□□□ -0.43
APP-208ENST00000439274 MEF2CQ06413 473 aaPredicted RBP12.38□□□□□ -0.43
APP-208ENST00000439274 ATOH7Q8N100 152 aa12.38□□□□□ -0.43
APP-208ENST00000439274 RBMXL3Q8N7X1 1067 aaKnown RBP12.38□□□□□ -0.43
APP-208ENST00000439274 NUP37Q8NFH4 326 aa12.38□□□□□ -0.43
APP-208ENST00000439274 OR4B1Q8NGF8 309 aa12.38□□□□□ -0.43
APP-208ENST00000439274 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
APP-208ENST00000439274 RPH3ALQ9UNE2 315 aa12.38□□□□□ -0.43
APP-208ENST00000439274 PCNX1Q96RV3 2341 aa12.38□□□□□ -0.43
APP-208ENST00000439274 IGHV3-21A0A0B4J1V1 117 aa12.38□□□□□ -0.43
APP-208ENST00000439274 A0A1W2PPI3 338 aa12.38□□□□□ -0.43
APP-208ENST00000439274 DPRXA6NFQ7 191 aa12.38□□□□□ -0.43
APP-208ENST00000439274 CTRLP40313 264 aa12.38□□□□□ -0.43
APP-208ENST00000439274 HCP5Q6MZN7 132 aa12.38□□□□□ -0.43
APP-208ENST00000439274 IGFL3Q6UXB1 125 aa12.38□□□□□ -0.43
APP-208ENST00000439274 TMEM108Q6UXF1 575 aa12.38□□□□□ -0.43
APP-208ENST00000439274 SPACA3Q8IXA5 215 aa12.38□□□□□ -0.43
APP-208ENST00000439274 OR1L4Q8NGR5 311 aa12.38□□□□□ -0.43
APP-208ENST00000439274 TFPI2P48307 235 aa12.37□□□□□ -0.43
APP-208ENST00000439274 BPIFB3P59826 476 aa12.37□□□□□ -0.43
APP-208ENST00000439274 PRB3Q04118 309 aaPredicted RBP12.37□□□□□ -0.43
APP-208ENST00000439274 TBR1Q16650 682 aa12.37□□□□□ -0.43
APP-208ENST00000439274 PPIAL4AQ9Y536 164 aa12.37□□□□□ -0.43
APP-208ENST00000439274 PPIAL4EA0A075B759 164 aa12.37□□□□□ -0.43
APP-208ENST00000439274 C22orf46C9J442 243 aa12.37□□□□□ -0.43
APP-208ENST00000439274 PPIAL4DF5H284 164 aa12.37□□□□□ -0.43
APP-208ENST00000439274 INS-IGF2F8WCM5 200 aa12.37□□□□□ -0.43
APP-208ENST00000439274 H3BTX0 84 aa12.37□□□□□ -0.43
APP-208ENST00000439274 PPIAL4FP0DN26 164 aa12.37□□□□□ -0.43
APP-208ENST00000439274 CAMPP49913 170 aa12.37□□□□□ -0.43
APP-208ENST00000439274 DLX1P56177 255 aa12.37□□□□□ -0.43
APP-208ENST00000439274 BSPH1Q075Z2 132 aa12.37□□□□□ -0.43
APP-208ENST00000439274 LCN12Q6JVE5 192 aa12.37□□□□□ -0.43
APP-208ENST00000439274 PDPNQ86YL7 162 aa12.37□□□□□ -0.43
APP-208ENST00000439274 GRAMD2BQ96HH9 432 aa12.37□□□□□ -0.43
APP-208ENST00000439274 LPAR2Q9HBW0 351 aa12.37□□□□□ -0.43
APP-208ENST00000439274 VWC2LB2RUY7 222 aa12.36□□□□□ -0.43
APP-208ENST00000439274 ENSAO43768 121 aaKnown RBP12.36□□□□□ -0.43
APP-208ENST00000439274 TNXAQ16473 311 aa12.36□□□□□ -0.43
APP-208ENST00000439274 MAJINQ3KP22 176 aa12.36□□□□□ -0.43
APP-208ENST00000439274 OR1B1Q8NGR6 318 aa12.36□□□□□ -0.43
APP-208ENST00000439274 CTSZQ9UBR2 303 aa12.36□□□□□ -0.43
APP-208ENST00000439274 SH3BGRL2Q9UJC5 107 aa12.36□□□□□ -0.43
APP-208ENST00000439274 WASHC3Q9Y3C0 194 aa12.36□□□□□ -0.43
APP-208ENST00000439274 TMEM178BH3BS89 294 aa12.36□□□□□ -0.43
APP-208ENST00000439274 NPSP0C0P6 89 aa12.36□□□□□ -0.43
APP-208ENST00000439274 PRRX1P54821 245 aa12.36□□□□□ -0.43
APP-208ENST00000439274 MRGPRG-AS1Q2M3A8 158 aa12.36□□□□□ -0.43
APP-208ENST00000439274 FAM231DQ6ZW35 169 aa12.36□□□□□ -0.43
APP-208ENST00000439274 THAP8Q8NA92 274 aa12.36□□□□□ -0.43
APP-208ENST00000439274 VSTM2AQ8TAG5 236 aa12.36□□□□□ -0.43
APP-208ENST00000439274 ST6GALNAC6Q969X2 333 aa12.36□□□□□ -0.43
APP-208ENST00000439274 HIGD1CA8MV81 97 aa12.35□□□□□ -0.43
APP-208ENST00000439274 SLC25A5P05141 298 aaKnown RBP12.35□□□□□ -0.43
APP-208ENST00000439274 SUB1P53999 127 aaKnown RBP eCLIP12.35□□□□□ -0.43
APP-208ENST00000439274 MMDQ15546 238 aa12.35□□□□□ -0.43
APP-208ENST00000439274 MRPL52Q86TS9 123 aaKnown RBP12.35□□□□□ -0.43
APP-208ENST00000439274 FAM57AQ8TBR7 257 aa12.35□□□□□ -0.43
APP-208ENST00000439274 C7orf69Q9H7B7 122 aa12.35□□□□□ -0.43
APP-208ENST00000439274 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
APP-208ENST00000439274 CUL9Q8IWT3 2517 aa12.35□□□□□ -0.43
APP-208ENST00000439274 A0A0G2JNJ9 132 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms