RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 ASCL2Q99929 193 aa11.45□□□□□ -0.58
LRCH3-206ENST00000438796 NHP2Q9NX24 153 aaKnown RBP11.45□□□□□ -0.58
LRCH3-206ENST00000438796 H3BUX3 64 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 DOCK4Q8N1I0 1966 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 FCN3O75636 299 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 IGHV1-46P01743 117 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 OR9G9P0C7N8 305 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 CD300EQ496F6 205 aaPredicted RBP11.44□□□□□ -0.58
LRCH3-206ENST00000438796 C15orf32Q32M92 178 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 COL24A1Q17RW2 1714 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 TNS1Q9HBL0 1735 aaKnown RBP11.44□□□□□ -0.58
LRCH3-206ENST00000438796 PGPEP1LA6NFU8 196 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 PAX4O43316 350 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 STAG3L3P0CL85 134 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 TMEM249Q2WGJ8 235 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 TMEM86BQ8N661 226 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 PSMG3Q9BT73 122 aaPredicted RBP11.44□□□□□ -0.58
LRCH3-206ENST00000438796 TM2D1Q9BX74 207 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 LOC285556D6RIA3 1793 aa11.44□□□□□ -0.58
LRCH3-206ENST00000438796 COL4A1P02462 1669 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 SELLP14151 372 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 ZNF600Q6ZNG1 722 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 IGKV1D-13A0A0B4J2D9 117 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 IGKV1-13P0DP09 117 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 NYNRINQ9P2P1 1898 aaKnown RBP11.43□□□□□ -0.58
LRCH3-206ENST00000438796 C15orf61A6NNL5 157 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 ZNF625Q96I27 306 aaPredicted RBP11.43□□□□□ -0.58
LRCH3-206ENST00000438796 LAMTOR3Q9UHA4 124 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 CGB3P0DN86 165 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 IGLV3-21P80748 117 aaPredicted RBP11.43□□□□□ -0.58
LRCH3-206ENST00000438796 PSG8Q9UQ74 426 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 KIAA2026Q5HYC2 2103 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 E9PLN8 166 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 FOXL1Q12952 345 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 FGFBP3Q8TAT2 258 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 LYZL4Q96KX0 146 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 SLC50A1Q9BRV3 221 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 MYO7BQ6PIF6 2116 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 POLEQ07864 2286 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 DEFB130BP0DP73 79 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 DEFB130AP0DP74 79 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 ZNF497Q6ZNH5 498 aa11.43□□□□□ -0.58
LRCH3-206ENST00000438796 LSM4Q9Y4Z0 139 aaKnown RBP11.43□□□□□ -0.58
LRCH3-206ENST00000438796 GGTLC3B5MD39 225 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 UNQ6494/PRO21346Q6UXR6 183 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 LURAP1LQ8IV03 231 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 EXOC3-AS1Q8N2X6 119 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 CYSLTR1Q9Y271 337 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 IGHV2-26A0A0B4J1V2 119 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 H3BUT2 72 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 CFHR1Q03591 330 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 SRSF4Q08170 494 aaKnown RBP11.42□□□□□ -0.58
LRCH3-206ENST00000438796 TMEM200BQ69YZ2 307 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 EPDR1Q9UM22 224 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 SBF2Q86WG5 1849 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 HIST1H4AP62805 103 aaKnown RBP11.42□□□□□ -0.58
LRCH3-206ENST00000438796 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 SLC25A39Q9BZJ4 359 aaPredicted RBP11.42□□□□□ -0.58
LRCH3-206ENST00000438796 CACNA1DQ01668 2161 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 YPEL1O60688 119 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 PVRIGQ6DKI7 326 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 YPEL2Q96QA6 119 aa11.42□□□□□ -0.58
LRCH3-206ENST00000438796 NCR2O95944 276 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 CCL1P22362 96 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 ATP5IP56385 69 aaPredicted RBP11.41□□□□□ -0.58
LRCH3-206ENST00000438796 WBP1Q96G27 269 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 DIDO1Q9BTC0 2240 aaKnown RBP11.41□□□□□ -0.58
LRCH3-206ENST00000438796 SDK2Q58EX2 2172 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 FREM3P0C091 2139 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 J3QW42 95 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 C1QTNF9P0C862 333 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 GATA4P43694 442 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 CACNG8Q8WXS5 425 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 FAM110DQ8TAY7 271 aaPredicted RBP11.41□□□□□ -0.58
LRCH3-206ENST00000438796 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 DPM2O94777 84 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 ALPK2Q86TB3 2170 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 TRAV8-4A0A0B4J246 113 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 HOXA3O43365 443 aaPredicted RBP11.41□□□□□ -0.58
LRCH3-206ENST00000438796 KLF17Q5JT82 389 aaPredicted RBP11.41□□□□□ -0.58
LRCH3-206ENST00000438796 C1QL4Q86Z23 238 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 PMS2P5A8MQ11 134 aa11.41□□□□□ -0.58
LRCH3-206ENST00000438796 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 TOMM40O96008 361 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 TMEM155Q4W5P6 130 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 ZNF876PQ49A33 203 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 ZNF48Q96MX3 618 aaPredicted RBP11.4□□□□□ -0.58
LRCH3-206ENST00000438796 SCRT1Q9BWW7 348 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 PHF3Q92576 2039 aaKnown RBP11.4□□□□□ -0.58
LRCH3-206ENST00000438796 WNK3Q9BYP7 1800 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 A0A0G2JNJ9 132 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 M0R2P5 195 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 ZNF525Q8N782 197 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 DERL1Q9BUN8 251 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 MBNL3Q9NUK0 354 aaKnown RBP11.4□□□□□ -0.58
LRCH3-206ENST00000438796 Q9UFV3 132 aa11.4□□□□□ -0.58
LRCH3-206ENST00000438796 A0A087WV48 116 aa11.4□□□□□ -0.59
LRCH3-206ENST00000438796 DMRTC2Q8IXT2 367 aaPredicted RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms