RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MOSP00540 346 aa9.49□□□□□ -0.89
TRAPPC9-202ENST00000438773 C10orf55Q5SWW7 151 aa9.49□□□□□ -0.89
TRAPPC9-202ENST00000438773 COL5A1-AS1Q5SY13 56 aa9.49□□□□□ -0.89
TRAPPC9-202ENST00000438773 ODF3L1Q8IXM7 274 aa9.49□□□□□ -0.89
TRAPPC9-202ENST00000438773 TMEM183AQ8IXX5 376 aa9.49□□□□□ -0.89
TRAPPC9-202ENST00000438773 CLDND2Q8NHS1 167 aa9.49□□□□□ -0.89
TRAPPC9-202ENST00000438773 DOPEY1Q5JWR5 2465 aa9.49□□□□□ -0.89
TRAPPC9-202ENST00000438773 GRNP28799 593 aaKnown RBP9.49□□□□□ -0.89
TRAPPC9-202ENST00000438773 ZNF506Q5JVG8 444 aa9.49□□□□□ -0.89
TRAPPC9-202ENST00000438773 SMIM15Q7Z3B0 74 aa9.49□□□□□ -0.89
TRAPPC9-202ENST00000438773 IGHV2-26A0A0B4J1V2 119 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 ARL16Q0P5N6 197 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 ZNF124Q15973 351 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 LY6EQ16553 131 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 OR8A1Q8NGG7 326 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 IGHV3-35A0A0C4DH35 117 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 J3KRW8 73 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 MAS1LP35410 378 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 OR4A5Q8NH83 315 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 RAB37Q96AX2 223 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 TIMM23O14925 209 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 GOSR1O95249 250 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 CD81P60033 236 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 GTF2H5Q6ZYL4 71 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 PPP1R27Q86WC6 154 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 OR10W1Q8NGF6 305 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 Q8TCH9 128 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 TXNDC17Q9BRA2 123 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 GCGP01275 180 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 SLC25A48Q6ZT89 311 aaKnown RBP9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 PMCHL2Q9BQD1 86 aa9.48□□□□□ -0.89
TRAPPC9-202ENST00000438773 ZNF462Q96JM2 2506 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 EFNA4P52798 201 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 TAS2R60P59551 318 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 PRCDQ00LT1 54 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 Q8NA96 180 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 S4R3C0 116 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 DYSFO75923 2080 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 IGKV3-7A0A075B6H7 116 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 MUC21A0A0G2JKD1 596 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 MUC21A0A140T8X8 626 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 APCSP02743 223 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 MFAP4P55083 255 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 MUC21Q5SSG8 566 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 TMEM144Q7Z5S9 345 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 TNFRSF14Q92956 283 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 CLEC5AQ9NY25 188 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 WDR83OSQ9Y284 106 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 WDFY4Q6ZS81 3184 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 FAM90A9PA6NNJ1 464 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 IGKV1-16P04430 117 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 GCHFRP30047 84 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 SRSF12Q8WXF0 261 aaKnown RBP9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 CACNG8Q8WXS5 425 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 SDF2L1Q9HCN8 221 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 YAE1D1Q9NRH1 226 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 ZFYVE26Q68DK2 2539 aa9.47□□□□□ -0.89
TRAPPC9-202ENST00000438773 M0QZ24 198 aa9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 RPL23P62829 140 aaKnown RBP9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 TMEM14EPQ6UXP3 125 aa9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 CYP2G1PQ6ZSU1 146 aa9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 TMEM256Q8N2U0 113 aa9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 OR52E5Q8NH55 327 aa9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 CHD3Q12873 2000 aaKnown RBP9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 AMBPP02760 352 aa9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 PF4V1P10720 104 aa9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 MYOD1P15172 320 aa9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 SPRNQ5BIV9 151 aa9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 LHFPL4Q7Z7J7 247 aa9.46□□□□□ -0.89
TRAPPC9-202ENST00000438773 SCO2A0A1W2PP80 73 aa9.46□□□□□ -0.9
TRAPPC9-202ENST00000438773 PGPA6NDG6 321 aa9.46□□□□□ -0.9
TRAPPC9-202ENST00000438773 IGKV1-39P01597 117 aa9.46□□□□□ -0.9
TRAPPC9-202ENST00000438773 IGKV1D-39P04432 117 aa9.46□□□□□ -0.9
TRAPPC9-202ENST00000438773 COL8A1P27658 744 aa9.46□□□□□ -0.9
TRAPPC9-202ENST00000438773 C7orf69Q9H7B7 122 aa9.46□□□□□ -0.9
TRAPPC9-202ENST00000438773 TEX50A0A1B0GTY4 177 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 TMEM250H0YL14 139 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 RELBQ01201 579 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 NEU1Q99519 415 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 C19orf24Q9BVV8 132 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 C11orf1Q9H5F2 150 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 PLXNB1O43157 2135 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 EXPH5Q8NEV8 1989 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 C15orf65H3BRN8 121 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 WNT2P09544 360 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 FCGR2BP31994 310 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 TDGF1P3P51864 188 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 KLRD1Q13241 179 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 GRAMD2BQ96HH9 432 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 A0A1B0GW64 132 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 NBR2O15453 112 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 MMP23AO75900 390 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 BPIFA4PQ86YQ2 179 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 COL5A1P20908 1838 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 SERF1AO75920 110 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 TGFAP01135 160 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 RNASEH2CQ8TDP1 164 aaKnown RBP9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 DERL1Q9BUN8 251 aa9.45□□□□□ -0.9
TRAPPC9-202ENST00000438773 FOXA2Q9Y261 457 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms