RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 IGLC1P0CG04 106 aa18.47■□□□□ 0.55
RAPGEF1-206ENST00000438647 OR10J1P30954 320 aa18.47■□□□□ 0.55
RAPGEF1-206ENST00000438647 TIGITQ495A1 244 aa18.47■□□□□ 0.55
RAPGEF1-206ENST00000438647 CIB3Q96Q77 187 aaPredicted RBP18.47■□□□□ 0.55
RAPGEF1-206ENST00000438647 METTL26Q96S19 204 aa18.47■□□□□ 0.55
RAPGEF1-206ENST00000438647 CCDC32Q9BV29 185 aa18.47■□□□□ 0.55
RAPGEF1-206ENST00000438647 A0A1W2PS18 150 aa18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 NPPCP23582 126 aa18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 PAFAH1B2P68402 229 aa18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 DHRS2Q13268 280 aa18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 C4orf46Q504U0 113 aa18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 GGNBP1Q5YKI7 109 aa18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 LYG2Q86SG7 212 aa18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 Q8WTZ3 238 aa18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 NARS2Q96I59 477 aaKnown RBP18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 FAM110AQ9BQ89 295 aa18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 VSIRQ9H7M9 311 aa18.46■□□□□ 0.55
RAPGEF1-206ENST00000438647 IGHV3OR16-13A0A075B7E8 117 aa18.45■□□□□ 0.54
RAPGEF1-206ENST00000438647 IGHV3-74A0A0B4J1X5 117 aa18.45■□□□□ 0.54
RAPGEF1-206ENST00000438647 LYRM1O43325 122 aa18.45■□□□□ 0.54
RAPGEF1-206ENST00000438647 YPEL3P61236 119 aaPredicted RBP18.45■□□□□ 0.54
RAPGEF1-206ENST00000438647 RAB11AP62491 216 aa18.45■□□□□ 0.54
RAPGEF1-206ENST00000438647 ST8SIA2Q92186 375 aa18.45■□□□□ 0.54
RAPGEF1-206ENST00000438647 ACY3Q96HD9 319 aa18.45■□□□□ 0.54
RAPGEF1-206ENST00000438647 LOC102724200A0A096LPH7 203 aaPredicted RBP18.44■□□□□ 0.54
RAPGEF1-206ENST00000438647 IFNA21P01568 189 aa18.44■□□□□ 0.54
RAPGEF1-206ENST00000438647 CMC4P56277 68 aaPredicted RBP18.44■□□□□ 0.54
RAPGEF1-206ENST00000438647 RPP30P78346 268 aaKnown RBP18.44■□□□□ 0.54
RAPGEF1-206ENST00000438647 FAM90A2PQ658T7 463 aa18.44■□□□□ 0.54
RAPGEF1-206ENST00000438647 TCF24Q7RTU0 167 aa18.44■□□□□ 0.54
RAPGEF1-206ENST00000438647 S100ZQ8WXG8 99 aa18.44■□□□□ 0.54
RAPGEF1-206ENST00000438647 NPIPB3Q92617 1050 aa18.44■□□□□ 0.54
RAPGEF1-206ENST00000438647 GGTLC1Q9BX51 225 aa18.44■□□□□ 0.54
RAPGEF1-206ENST00000438647 PLA2G10O15496 165 aa18.43■□□□□ 0.54
RAPGEF1-206ENST00000438647 SYNGR2O43760 224 aa18.43■□□□□ 0.54
RAPGEF1-206ENST00000438647 IAPPP10997 89 aa18.43■□□□□ 0.54
RAPGEF1-206ENST00000438647 ANXA7P20073 488 aaKnown RBP18.43■□□□□ 0.54
RAPGEF1-206ENST00000438647 GPX4P36969 197 aaPredicted RBP18.43■□□□□ 0.54
RAPGEF1-206ENST00000438647 CITED4Q96RK1 184 aa18.43■□□□□ 0.54
RAPGEF1-206ENST00000438647 UBQLN2Q9UHD9 624 aa18.43■□□□□ 0.54
RAPGEF1-206ENST00000438647 CRYBB3P26998 211 aa18.42■□□□□ 0.54
RAPGEF1-206ENST00000438647 ODF3L2Q3SX64 289 aa18.42■□□□□ 0.54
RAPGEF1-206ENST00000438647 SLC35E1Q96K37 410 aa18.42■□□□□ 0.54
RAPGEF1-206ENST00000438647 C20orf85Q9H1P6 137 aa18.42■□□□□ 0.54
RAPGEF1-206ENST00000438647 DNAH7Q8WXX0 4024 aa18.42■□□□□ 0.54
RAPGEF1-206ENST00000438647 IGKV3-7A0A075B6H7 116 aa18.41■□□□□ 0.54
RAPGEF1-206ENST00000438647 A6NHS1 94 aa18.41■□□□□ 0.54
RAPGEF1-206ENST00000438647 ADAP1O75689 374 aa18.41■□□□□ 0.54
RAPGEF1-206ENST00000438647 APOHP02749 345 aaPredicted RBP18.41■□□□□ 0.54
RAPGEF1-206ENST00000438647 GRAMD2BQ96HH9 432 aa18.41■□□□□ 0.54
RAPGEF1-206ENST00000438647 IGHV3-66A0A0C4DH42 116 aa18.4■□□□□ 0.54
RAPGEF1-206ENST00000438647 C3orf84H3BNL1 204 aa18.4■□□□□ 0.54
RAPGEF1-206ENST00000438647 DFFBO76075 338 aa18.4■□□□□ 0.54
RAPGEF1-206ENST00000438647 TFPI2P48307 235 aa18.4■□□□□ 0.54
RAPGEF1-206ENST00000438647 RPL11P62913 178 aaKnown RBP18.4■□□□□ 0.54
RAPGEF1-206ENST00000438647 MAGT1Q9H0U3 335 aa18.4■□□□□ 0.54
RAPGEF1-206ENST00000438647 PAIP2BQ9ULR5 123 aaKnown RBP18.4■□□□□ 0.54
RAPGEF1-206ENST00000438647 DNASE2O00115 360 aaPredicted RBP18.39■□□□□ 0.53
RAPGEF1-206ENST00000438647 WRBO00258 174 aa18.39■□□□□ 0.53
RAPGEF1-206ENST00000438647 TOMM40O96008 361 aa18.39■□□□□ 0.53
RAPGEF1-206ENST00000438647 RD3LP0DJH9 198 aa18.39■□□□□ 0.53
RAPGEF1-206ENST00000438647 GBGT1Q8N5D6 347 aa18.39■□□□□ 0.53
RAPGEF1-206ENST00000438647 NBEAL2Q6ZNJ1 2754 aa18.38■□□□□ 0.53
RAPGEF1-206ENST00000438647 TRAV2A0A0B4J234 112 aa18.38■□□□□ 0.53
RAPGEF1-206ENST00000438647 TCRBP04435 133 aa18.38■□□□□ 0.53
RAPGEF1-206ENST00000438647 IL4P05112 153 aa18.38■□□□□ 0.53
RAPGEF1-206ENST00000438647 HNRNPCP07910 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
RAPGEF1-206ENST00000438647 APOC4P55056 127 aa18.38■□□□□ 0.53
RAPGEF1-206ENST00000438647 LILRB2Q8N423 598 aa18.38■□□□□ 0.53
RAPGEF1-206ENST00000438647 MUC7Q8TAX7 377 aa18.38■□□□□ 0.53
RAPGEF1-206ENST00000438647 MITD1Q8WV92 249 aa18.38■□□□□ 0.53
RAPGEF1-206ENST00000438647 MS4A6AQ9H2W1 248 aa18.38■□□□□ 0.53
RAPGEF1-206ENST00000438647 ZFP92A6NM28 416 aa18.37■□□□□ 0.53
RAPGEF1-206ENST00000438647 FABP1P07148 127 aa18.37■□□□□ 0.53
RAPGEF1-206ENST00000438647 NKX2-1P43699 371 aaPredicted RBP18.37■□□□□ 0.53
RAPGEF1-206ENST00000438647 P2RY1P47900 373 aa18.37■□□□□ 0.53
RAPGEF1-206ENST00000438647 EIF2B2P49770 351 aaKnown RBP18.37■□□□□ 0.53
RAPGEF1-206ENST00000438647 ID3Q02535 119 aa18.37■□□□□ 0.53
RAPGEF1-206ENST00000438647 GAMTQ14353 236 aa18.37■□□□□ 0.53
RAPGEF1-206ENST00000438647 PTTG2Q9NZH5 202 aa18.37■□□□□ 0.53
RAPGEF1-206ENST00000438647 MPTX1A8MV57 137 aa18.36■□□□□ 0.53
RAPGEF1-206ENST00000438647 OR51G1Q8NGK1 321 aa18.36■□□□□ 0.53
RAPGEF1-206ENST00000438647 EDA2RQ9HAV5 297 aa18.36■□□□□ 0.53
RAPGEF1-206ENST00000438647 RETNQ9HD89 108 aa18.36■□□□□ 0.53
RAPGEF1-206ENST00000438647 NUDT15Q9NV35 164 aa18.36■□□□□ 0.53
RAPGEF1-206ENST00000438647 STRAPQ9Y3F4 350 aaKnown RBP18.36■□□□□ 0.53
RAPGEF1-206ENST00000438647 PSG1P11464 419 aa18.35■□□□□ 0.53
RAPGEF1-206ENST00000438647 SPANXN5Q5MJ07 72 aa18.35■□□□□ 0.53
RAPGEF1-206ENST00000438647 MZT2BQ6NZ67 158 aa18.35■□□□□ 0.53
RAPGEF1-206ENST00000438647 WFDC3Q8IUB2 231 aa18.35■□□□□ 0.53
RAPGEF1-206ENST00000438647 OR4D5Q8NGN0 318 aa18.35■□□□□ 0.53
RAPGEF1-206ENST00000438647 WDR12Q9GZL7 423 aaKnown RBP18.35■□□□□ 0.53
RAPGEF1-206ENST00000438647 RABAC1Q9UI14 185 aa18.35■□□□□ 0.53
RAPGEF1-206ENST00000438647 U3KQE9 123 aa18.35■□□□□ 0.53
RAPGEF1-206ENST00000438647 TRAV6A0A075B6T7 132 aa18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 KIR2DL5BA0A0G2JN68 375 aa18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 KIR2DL5BA0A0G2JPC4 375 aa18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 FAM240BA0A1B0GVZ2 78 aa18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 HELTA6NFD8 242 aa18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 POLR2GP62487 172 aaKnown RBP eCLIP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms