RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 CHEK1O14757 476 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 COL8A2P25067 703 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 TMEM37Q8WXS4 190 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 FAM103A1Q9BTL3 118 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 DKK4Q9UBT3 224 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 CYSLTR1Q9Y271 337 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 KIAA1324LA8MWY0 1029 aaPredicted RBP6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 HYPMO75409 117 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 AMBPP02760 352 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 HSPB1P04792 205 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 ID1P41134 155 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 PCSK4Q6UW60 755 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 DNM1P46Q6ZS02 220 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 OSR1Q8TAX0 266 aaPredicted RBP6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 ZNF418Q8TF45 676 aaPredicted RBP6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 TMEM133Q9H2Q1 129 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 H3BTX0 84 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 CCL25O15444 150 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 LYPD2Q6UXB3 125 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 WFDC3Q8IUB2 231 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 CYB561D1Q8N8Q1 229 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 OR2T10Q8NGZ9 312 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 RPRMQ9NS64 109 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 HIVEP3Q5T1R4 2406 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 C7orf77A4D0Y5 90 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 DUTP33316 252 aaKnown RBP6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 DLX6P56179 175 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 RPL30P62888 115 aaKnown RBP6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 IGFL2Q6UWQ7 119 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 C10orf142B7Z368 130 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 CD55P08174 381 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 NTF3P20783 257 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 S100A4P26447 101 aaKnown RBP6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 C16orf82Q7Z2V1 217 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 OR5AU1Q8NGC0 362 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 MBD3L1Q8WWY6 194 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 NRGNQ92686 78 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 MANBALQ9NQG1 85 aa6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 RPUSD1Q9UJJ7 312 aaKnown RBP6.7□□□□□ -1.34
TMEM39A-202ENST00000438581 IGHV3OR16-13A0A075B7E8 117 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 IGHV3-74A0A0B4J1X5 117 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 SIVA1O15304 175 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 CXorf1O96002 111 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 MOSP00540 346 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 CD99P14209 185 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 GRNP28799 593 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 TMEM200BQ69YZ2 307 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 ZNF880Q6PDB4 577 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 WDR86Q86TI4 376 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 OR4A5Q8NH83 315 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 GRAMD2BQ96HH9 432 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 IGHV3OR16-8A0A075B7F1 116 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 H3BQ15 152 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 MPDU1O75352 247 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 SAA1P0DJI8 122 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 LOXL3P58215 753 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 CD300EQ496F6 205 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 TPTE2P1Q5T6R2 138 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 FAM53AQ6NSI3 398 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 NUP37Q8NFH4 326 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 PAXXQ9BUH6 204 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 RABAC1Q9UI14 185 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 HIST1H1EP10412 219 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 BCL2P10415 239 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 C6orf226Q5I0X4 101 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 C12orf54Q6X4T0 127 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 ASCL4Q6XD76 172 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 LCNL1Q6ZST4 164 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 C18orf12Q96KH6 178 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 MAP1LC3CQ9BXW4 147 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 GAGE10A6NGK3 116 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 IGHV3-23P01764 117 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 C8orf88P0DMB2 117 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 GATA2P23769 480 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 GALR1P47211 349 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 WDR25Q64LD2 544 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 IMMP2LQ96T52 175 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 RARRES2Q99969 163 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 ANAPC13Q9BS18 74 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 HIGD1AQ9Y241 93 aa6.69□□□□□ -1.34
TMEM39A-202ENST00000438581 CEACAM4O75871 244 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 CAMPP49913 170 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 SMIM20Q8N5G0 67 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 SGK494Q96LW2 274 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 PRUNE2Q8WUY3 3088 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 OR2J3O76001 311 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 NDUFB4O95168 129 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 TFF3Q07654 80 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 C10orf55Q5SWW7 151 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 DUX4L9Q6RFH8 374 aaPredicted RBP6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 HEPN1Q6WQI6 88 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 RNF166Q96A37 237 aaPredicted RBP6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 C20orf173Q96LM9 149 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 WDR61Q9GZS3 305 aaKnown RBP6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 ZNRD1Q9P1U0 126 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 NAT8BQ9UHF3 227 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 USP9YO00507 2555 aaPredicted RBP6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 NPIPB11E5RHQ5 1161 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 HAX1O00165 279 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms