RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 COL6A5A8TX70 2615 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 TENM1Q9UKZ4 2725 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 BMPR1BO00238 502 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 DFFBO76075 338 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 IGHV3-48P01763 117 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 CTSGP08311 255 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 IGLC1P0CG04 106 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 ARL16Q0P5N6 197 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 DEFB136Q30KP8 78 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 GPHB5Q86YW7 130 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 THAP8Q8NA92 274 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 OR5C1Q8NGR4 320 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 TMEM147Q9BVK8 224 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 UQCC1Q9NVA1 299 aa14.16□□□□□ -0.14
HDAC6-208ENST00000438518 TRBV12-3P01733 135 aa14.15□□□□□ -0.14
HDAC6-208ENST00000438518 C1QBP02746 253 aa14.15□□□□□ -0.14
HDAC6-208ENST00000438518 OR10J1P30954 320 aa14.15□□□□□ -0.14
HDAC6-208ENST00000438518 HOXD3P31249 432 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-208ENST00000438518 YPEL3P61236 119 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-208ENST00000438518 NHLH2Q02577 135 aa14.15□□□□□ -0.14
HDAC6-208ENST00000438518 ZNF345Q14585 488 aa14.15□□□□□ -0.14
HDAC6-208ENST00000438518 HIST2H2BDQ6DRA6 164 aa14.15□□□□□ -0.14
HDAC6-208ENST00000438518 MRPL36Q9P0J6 103 aaKnown RBP14.15□□□□□ -0.14
HDAC6-208ENST00000438518 SMCO3A2RU48 225 aa14.14□□□□□ -0.15
HDAC6-208ENST00000438518 ZFP92A6NM28 416 aa14.14□□□□□ -0.15
HDAC6-208ENST00000438518 PPP5D1E7EU14 171 aa14.14□□□□□ -0.15
HDAC6-208ENST00000438518 NDUFA4O00483 81 aa14.14□□□□□ -0.15
HDAC6-208ENST00000438518 MPDU1O75352 247 aa14.14□□□□□ -0.15
HDAC6-208ENST00000438518 ADMP35318 185 aa14.14□□□□□ -0.15
HDAC6-208ENST00000438518 FAM106AQ4KMX7 169 aa14.14□□□□□ -0.15
HDAC6-208ENST00000438518 TEPPQ6URK8 271 aa14.14□□□□□ -0.15
HDAC6-208ENST00000438518 ZNF600Q6ZNG1 722 aa14.14□□□□□ -0.15
HDAC6-208ENST00000438518 TRGV9Q99603 122 aa14.14□□□□□ -0.15
HDAC6-208ENST00000438518 RNF222A6NCQ9 220 aa14.13□□□□□ -0.15
HDAC6-208ENST00000438518 LGALS9O00182 355 aa14.13□□□□□ -0.15
HDAC6-208ENST00000438518 CFDP00746 253 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-208ENST00000438518 OR2F1Q13607 317 aa14.13□□□□□ -0.15
HDAC6-208ENST00000438518 RAB31Q13636 194 aa14.13□□□□□ -0.15
HDAC6-208ENST00000438518 TREML4Q6UXN2 200 aa14.13□□□□□ -0.15
HDAC6-208ENST00000438518 REC114Q7Z4M0 266 aa14.13□□□□□ -0.15
HDAC6-208ENST00000438518 C1QL4Q86Z23 238 aa14.13□□□□□ -0.15
HDAC6-208ENST00000438518 HYLS1Q96M11 299 aa14.13□□□□□ -0.15
HDAC6-208ENST00000438518 ATP5SQ99766 215 aa14.13□□□□□ -0.15
HDAC6-208ENST00000438518 CHRDL1Q9BU40 450 aa14.13□□□□□ -0.15
HDAC6-208ENST00000438518 SMLR1H3BR10 107 aa14.12□□□□□ -0.15
HDAC6-208ENST00000438518 ARPC5O15511 151 aa14.12□□□□□ -0.15
HDAC6-208ENST00000438518 IGKV1-17P01599 117 aa14.12□□□□□ -0.15
HDAC6-208ENST00000438518 SELENOTP62341 195 aa14.12□□□□□ -0.15
HDAC6-208ENST00000438518 KLF5Q13887 457 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-208ENST00000438518 ZNF266Q14584 549 aa14.12□□□□□ -0.15
HDAC6-208ENST00000438518 Q8WTZ3 238 aa14.12□□□□□ -0.15
HDAC6-208ENST00000438518 NEURL2Q9BR09 285 aa14.12□□□□□ -0.15
HDAC6-208ENST00000438518 WDR83OSQ9Y284 106 aa14.12□□□□□ -0.15
HDAC6-208ENST00000438518 LSM4Q9Y4Z0 139 aaKnown RBP14.12□□□□□ -0.15
HDAC6-208ENST00000438518 TAAR5O14804 337 aa14.11□□□□□ -0.15
HDAC6-208ENST00000438518 OR2C1O95371 312 aa14.11□□□□□ -0.15
HDAC6-208ENST00000438518 TOMM40O96008 361 aa14.11□□□□□ -0.15
HDAC6-208ENST00000438518 AP2S1P53680 142 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-208ENST00000438518 ELLP55199 621 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-208ENST00000438518 LINC00482Q8N8I6 264 aa14.11□□□□□ -0.15
HDAC6-208ENST00000438518 PARD6GQ9BYG4 376 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-208ENST00000438518 MFFQ9GZY8 342 aa14.11□□□□□ -0.15
HDAC6-208ENST00000438518 PEMTQ9UBM1 199 aa14.11□□□□□ -0.15
HDAC6-208ENST00000438518 IGKV1D-37A0A075B6S9 117 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 IGKV1OR2-108A0A075B7D4 117 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 A0A0D9SG52 128 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 UBE2L5PA0A1B0GUS4 154 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 A8MWP6 167 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 TSPAN15O95858 294 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 SLURP1P55000 103 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 TIGITQ495A1 244 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 OR11H4Q8NGC9 324 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 TMEM190Q8WZ59 177 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 DUX3Q96PT4 197 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 GINS3Q9BRX5 216 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 FBXL17Q9UF56 701 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 UFC1Q9Y3C8 167 aa14.1□□□□□ -0.15
HDAC6-208ENST00000438518 K7EMT4 169 aa14.09□□□□□ -0.15
HDAC6-208ENST00000438518 OVOL1O14753 267 aa14.09□□□□□ -0.15
HDAC6-208ENST00000438518 IFNA5P01569 189 aa14.09□□□□□ -0.15
HDAC6-208ENST00000438518 RD3LP0DJH9 198 aa14.09□□□□□ -0.15
HDAC6-208ENST00000438518 CLINT1Q14677 625 aa14.09□□□□□ -0.15
HDAC6-208ENST00000438518 ZFP69Q49AA0 526 aa14.09□□□□□ -0.15
HDAC6-208ENST00000438518 OR51G1Q8NGK1 321 aa14.09□□□□□ -0.15
HDAC6-208ENST00000438518 DLX4Q92988 240 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-208ENST00000438518 WDR61Q9GZS3 305 aaKnown RBP14.09□□□□□ -0.15
HDAC6-208ENST00000438518 KCNIP2Q9NS61 270 aa14.09□□□□□ -0.15
HDAC6-208ENST00000438518 ANK2Q01484 3957 aa14.08□□□□□ -0.16
HDAC6-208ENST00000438518 SYNJ2BPP57105 145 aa14.08□□□□□ -0.16
HDAC6-208ENST00000438518 PRR31Q5SQ13 230 aa14.08□□□□□ -0.16
HDAC6-208ENST00000438518 BTNL8Q6UX41 500 aa14.08□□□□□ -0.16
HDAC6-208ENST00000438518 CYP2G1PQ6ZSU1 146 aa14.08□□□□□ -0.16
HDAC6-208ENST00000438518 KCNRGQ8N5I3 272 aa14.08□□□□□ -0.16
HDAC6-208ENST00000438518 WFDC9Q8NEX5 89 aa14.08□□□□□ -0.16
HDAC6-208ENST00000438518 BPIFCQ8NFQ6 507 aa14.08□□□□□ -0.16
HDAC6-208ENST00000438518 OR9G4Q8NGQ1 327 aa14.08□□□□□ -0.16
HDAC6-208ENST00000438518 MCRIP2Q9BUT9 160 aaKnown RBP14.08□□□□□ -0.16
HDAC6-208ENST00000438518 PUS1Q9Y606 427 aaKnown RBP eCLIP14.08□□□□□ -0.16
HDAC6-208ENST00000438518 STAB1Q9NY15 2570 aa14.08□□□□□ -0.16
HDAC6-208ENST00000438518 AGPAT2O15120 278 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms