RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 POLR3KQ9Y2Y1 108 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-205ENST00000438362 LOC102724200A0A096LPH7 203 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-205ENST00000438362 A6NNC1 897 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 WNT2P09544 360 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 PNKDQ8N490 385 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 ST6GALNAC3Q8NDV1 305 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 UTRNP46939 3433 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 ITGB1BP1O14713 200 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 DLEU1O43261 78 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 RPS20P60866 119 aaKnown RBP5.48□□□□□ -1.53
CSDE1-205ENST00000438362 YPEL3P61236 119 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-205ENST00000438362 ARF6P62330 175 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 BSPH1Q075Z2 132 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 Q6ZR03 302 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 ZNF114Q8NC26 417 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 C11orf1Q9H5F2 150 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 YLPM1P49750 1951 aaKnown RBP5.48□□□□□ -1.53
CSDE1-205ENST00000438362 PCNTO95613 3336 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 CDX4O14627 284 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-205ENST00000438362 APOHP02749 345 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-205ENST00000438362 Q0VG73 95 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 ECSCRQ19T08 205 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 COA6Q5JTJ3 125 aaKnown RBP5.48□□□□□ -1.53
CSDE1-205ENST00000438362 TEX45Q8NA69 505 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 FAM57AQ8TBR7 257 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 SNHG12Q9BXW3 62 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 B9A039 149 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 C3orf79P0CE67 100 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 MLANAQ16655 118 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 RASL11AQ6T310 242 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 ATP5L2Q7Z4Y8 100 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 MYOZ3Q8TDC0 251 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 PMCHL2Q9BQD1 86 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 C20orf144Q9BQM9 153 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 OTORQ9NRC9 128 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 PLCE1Q9P212 2302 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 MED13LQ71F56 2210 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 RNASE2P10153 161 aaKnown RBP5.48□□□□□ -1.53
CSDE1-205ENST00000438362 PSG9Q00887 426 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 SAPCD1Q5SSQ6 148 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 NIT1Q86X76 327 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 TMEM167AQ8TBQ9 72 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 TMEM14BQ9NUH8 114 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 CLEC5AQ9NY25 188 aa5.48□□□□□ -1.53
CSDE1-205ENST00000438362 TTC28Q96AY4 2481 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 IGKV1-16P04430 117 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 LINC00614P0C842 121 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 APOBEC3AP31941 199 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-205ENST00000438362 TDGF1P3P51864 188 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 RELQ04864 619 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-205ENST00000438362 SPANXN1Q5VSR9 72 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 SLC25A48Q6ZT89 311 aaKnown RBP5.47□□□□□ -1.53
CSDE1-205ENST00000438362 MRPL52Q86TS9 123 aaKnown RBP5.47□□□□□ -1.53
CSDE1-205ENST00000438362 MUC15Q8N387 334 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 GUCD1Q96NT3 240 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 SCRT1Q9BWW7 348 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 MAP1LC3AQ9H492 121 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 WDR87Q6ZQQ6 2873 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 C15orf65H3BRN8 121 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 TMEM249Q2WGJ8 235 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 Q6AWC8 147 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 LCN12Q6JVE5 192 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 PPP1R27Q86WC6 154 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 TMEM133Q9H2Q1 129 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 CENPFP49454 3210 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 ADAMTS9Q9P2N4 1935 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 A0A1B0GW15 77 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 CCL21O00585 134 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 TMEM78Q5T7P6 136 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 LCE2DQ5TA82 110 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-205ENST00000438362 ZNF788Q6ZQV5 615 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 CIARTQ8N365 385 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-205ENST00000438362 FAM169BQ8N8A8 192 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 PRELID3AQ96N28 172 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 GAFA1Q96PS6 74 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 MRPL27Q9P0M9 148 aaKnown RBP5.47□□□□□ -1.53
CSDE1-205ENST00000438362 DPM3Q9P2X0 92 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 RABAC1Q9UI14 185 aa5.47□□□□□ -1.53
CSDE1-205ENST00000438362 VWC2Q2TAL6 325 aa5.46□□□□□ -1.53
CSDE1-205ENST00000438362 Q6ZPA2 131 aa5.46□□□□□ -1.53
CSDE1-205ENST00000438362 NUP35Q8NFH5 326 aa5.46□□□□□ -1.53
CSDE1-205ENST00000438362 LINC00479Q96M42 142 aa5.46□□□□□ -1.53
CSDE1-205ENST00000438362 PEF1Q9UBV8 284 aaKnown RBP5.46□□□□□ -1.53
CSDE1-205ENST00000438362 ARHGAP21Q5T5U3 1957 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 MBD3L4A6NDZ8 208 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-205ENST00000438362 MBD3L3A6NE82 208 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-205ENST00000438362 MBD3L5A6NJ08 208 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-205ENST00000438362 H0YJW9 148 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 J3KRW8 73 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 MBD3L2Q8NHZ7 208 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-205ENST00000438362 NEUROG1Q92886 237 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 C11orf52Q96A22 123 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 CHCHD1Q96BP2 118 aaKnown RBP5.46□□□□□ -1.54
CSDE1-205ENST00000438362 ZNF414Q96IQ9 312 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 TMEM208Q9BTX3 173 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 S4R3C0 116 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 IGHV3-35A0A0C4DH35 117 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 FAM181BA6NEQ2 426 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 F5H697 171 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 CDKN1AP38936 164 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms