RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 PGPA6NDG6 321 aa13.54□□□□□ -0.24
TTC3-209ENST00000438055 M0R143 59 aa13.54□□□□□ -0.24
TTC3-209ENST00000438055 APCSP02743 223 aa13.54□□□□□ -0.24
TTC3-209ENST00000438055 ATP5IP56385 69 aaPredicted RBP13.54□□□□□ -0.24
TTC3-209ENST00000438055 TAS2R60P59551 318 aa13.54□□□□□ -0.24
TTC3-209ENST00000438055 PRR30Q53SZ7 412 aaPredicted RBP13.54□□□□□ -0.24
TTC3-209ENST00000438055 INSIG2Q9Y5U4 225 aa13.54□□□□□ -0.24
TTC3-209ENST00000438055 TRAV9-1A0A075B6T8 112 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 TDRG1Q3Y452 100 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 TMEM177Q53S58 311 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 RITA1Q96K30 269 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 SLC25A2Q9BXI2 301 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 GSX1Q9H4S2 264 aaPredicted RBP13.53□□□□□ -0.24
TTC3-209ENST00000438055 TBL2Q9Y4P3 447 aaKnown RBP13.53□□□□□ -0.24
TTC3-209ENST00000438055 LY96Q9Y6Y9 160 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 TCAPO15273 167 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 RPL27AP46776 148 aaKnown RBP13.53□□□□□ -0.24
TTC3-209ENST00000438055 PPOXP50336 477 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 CX3CL1P78423 397 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 C3orf36Q3SXR2 165 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 TMEM167AQ8TBQ9 72 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 ZNF292O60281 2723 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 PEX7O00628 323 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 CNIH1O95406 144 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 MT-ND6P03923 174 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 TMEM183BQ1AE95 376 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 DMRTC2Q8IXT2 367 aaPredicted RBP13.53□□□□□ -0.24
TTC3-209ENST00000438055 FAM168AQ92567 244 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 CHODLQ9H9P2 273 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 MRPL36Q9P0J6 103 aaKnown RBP13.53□□□□□ -0.24
TTC3-209ENST00000438055 CTSZQ9UBR2 303 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 PTPRQQ9UMZ3 2332 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 ATRXP46100 2492 aa13.53□□□□□ -0.24
TTC3-209ENST00000438055 A0A1W2PPI3 338 aa13.52□□□□□ -0.24
TTC3-209ENST00000438055 DIRC3C9JPN6 131 aa13.52□□□□□ -0.24
TTC3-209ENST00000438055 ISLRO14498 428 aa13.52□□□□□ -0.24
TTC3-209ENST00000438055 LYZP61626 148 aa13.52□□□□□ -0.24
TTC3-209ENST00000438055 GNB1LQ9BYB4 327 aa13.52□□□□□ -0.24
TTC3-209ENST00000438055 TCRBV4S1A1TA0A5B7 111 aa13.52□□□□□ -0.25
TTC3-209ENST00000438055 AMY1AP04745 511 aa13.52□□□□□ -0.25
TTC3-209ENST00000438055 FOXC1Q12948 553 aa13.52□□□□□ -0.25
TTC3-209ENST00000438055 BORCS7Q96B45 105 aa13.52□□□□□ -0.25
TTC3-209ENST00000438055 CUL9Q8IWT3 2517 aa13.52□□□□□ -0.25
TTC3-209ENST00000438055 IGF2RP11717 2491 aa13.52□□□□□ -0.25
TTC3-209ENST00000438055 FAM90A27PA6NNH2 459 aa13.52□□□□□ -0.25
TTC3-209ENST00000438055 C1orf194Q5T5A4 169 aa13.52□□□□□ -0.25
TTC3-209ENST00000438055 TP53TG3Q9ULZ0 132 aa13.52□□□□□ -0.25
TTC3-209ENST00000438055 IGHV1-69-2A0A0G2JMI3 117 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 RBP4P02753 201 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 THBDP07204 575 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 CNTFRP26992 372 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 SELENOTP62341 195 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 OR2D3Q8NGH3 330 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 DAZAP1Q96EP5 407 aaKnown RBP13.51□□□□□ -0.25
TTC3-209ENST00000438055 SSBP4Q9BWG4 385 aaPredicted RBP13.51□□□□□ -0.25
TTC3-209ENST00000438055 A0A1W2PRD5 423 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 A0A1W2PRF3 423 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 A0A1W2PRM7 423 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 HSBP1O75506 76 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 HLA-DQA1P01909 254 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 MC5RP33032 325 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 GPR6P46095 362 aaPredicted RBP13.51□□□□□ -0.25
TTC3-209ENST00000438055 RPEQ96AT9 228 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 PERPQ96FX8 193 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 TRBV9A0A0B4J1U6 114 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 LOXP28300 417 aaPredicted RBP13.51□□□□□ -0.25
TTC3-209ENST00000438055 SSTP61278 116 aa13.51□□□□□ -0.25
TTC3-209ENST00000438055 DCHS1Q96JQ0 3298 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 ATOH7Q8N100 152 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 LINC01560Q8TB33 94 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 IGHV1-8P0DP01 117 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 RNASEKQ6P5S7 137 aaKnown RBP13.5□□□□□ -0.25
TTC3-209ENST00000438055 ASCL5Q7RTU5 278 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 FAM167A-AS1Q96KT0 104 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 SNHG12Q9BXW3 62 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 DSCAML1Q8TD84 2053 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 ETFRF1Q6IPR1 90 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 RCHY1Q96PM5 261 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 FBXL15Q9H469 300 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 NRN1Q9NPD7 142 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 ONECUT1Q9UBC0 465 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 CDC42EP3Q9UKI2 254 aa13.5□□□□□ -0.25
TTC3-209ENST00000438055 HYPMO75409 117 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 PATE2Q6UY27 113 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 TMEM136Q6ZRR5 245 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 BEND2Q8NDZ0 799 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 C2orf88Q9BSF0 95 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 LINC00574Q9H8X3 128 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 CD3EP07766 207 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 TMEM133Q9H2Q1 129 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 ARL2-SNX15V9GYD0 113 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 RAI1Q7Z5J4 1906 aaPredicted RBP13.49□□□□□ -0.25
TTC3-209ENST00000438055 E7EQL1 145 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 NBEAP1P0C6P0 100 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 RBPJQ06330 500 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 LBHQ53QV2 105 aaPredicted RBP13.49□□□□□ -0.25
TTC3-209ENST00000438055 NUDT10Q8NFP7 164 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 NUDT11Q96G61 164 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 TXN2Q99757 166 aa13.49□□□□□ -0.25
TTC3-209ENST00000438055 FAM87AP0C7U9 286 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms