RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 MIR17HGQ75NE6 70 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 RNF126Q9BV68 326 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 TCRBV4S1A1TA0A5B7 111 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 CENPVQ7Z7K6 275 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-209ENST00000437951 C21orf62Q9NYP8 219 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 BRCA1P38398 1863 aaKnown RBP9.71□□□□□ -0.85
PTCH1-209ENST00000437951 PTPRFP10586 1907 aa9.71□□□□□ -0.85
PTCH1-209ENST00000437951 PSG3Q16557 428 aa9.71□□□□□ -0.85
PTCH1-209ENST00000437951 MYMXA0A1B0GTQ4 84 aa9.71□□□□□ -0.85
PTCH1-209ENST00000437951 IGFBP3P17936 291 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-209ENST00000437951 CD300EQ496F6 205 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-209ENST00000437951 TTTY12Q9BZ98 90 aa9.71□□□□□ -0.86
PTCH1-209ENST00000437951 TAF1LQ8IZX4 1826 aa9.71□□□□□ -0.86
PTCH1-209ENST00000437951 TMEM126AQ9H061 195 aa9.71□□□□□ -0.86
PTCH1-209ENST00000437951 ADAMTSL3P82987 1691 aa9.71□□□□□ -0.86
PTCH1-209ENST00000437951 SMAD7O15105 426 aaKnown RBP9.71□□□□□ -0.86
PTCH1-209ENST00000437951 ZFP36L2P47974 494 aaKnown RBP9.71□□□□□ -0.86
PTCH1-209ENST00000437951 ATP5J2P56134 94 aa9.71□□□□□ -0.86
PTCH1-209ENST00000437951 GP6Q9HCN6 339 aa9.71□□□□□ -0.86
PTCH1-209ENST00000437951 PEMTQ9UBM1 199 aa9.71□□□□□ -0.86
PTCH1-209ENST00000437951 PSME4Q14997 1843 aa9.71□□□□□ -0.86
PTCH1-209ENST00000437951 TSC2P49815 1807 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 LINC00158P58513 81 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 MYF5P13349 255 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 ITLN1Q8WWA0 313 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 GFRA4Q9GZZ7 299 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 FBLN5Q9UBX5 448 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 C15orf61A6NNL5 157 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 IQCF6A8MYZ5 107 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 HOXB3P14651 431 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-209ENST00000437951 UBL5Q9BZL1 73 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 MMP23AO75900 390 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 DUSP15Q9H1R2 295 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-209ENST00000437951 MPV17L2Q567V2 206 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 FAM60AQ9NP50 221 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 PARP14Q460N5 1801 aa9.7□□□□□ -0.86
PTCH1-209ENST00000437951 LINC01565O15544 149 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 IL18BPO95998 194 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 IGKV1D-16P01601 117 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 RPL32P62910 135 aaKnown RBP9.69□□□□□ -0.86
PTCH1-209ENST00000437951 OCC1Q8TAD7 63 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 MUC21A0A0G2JKD1 596 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 MUC21A0A140T8X8 626 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 OVOL1O14753 267 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 MUC21Q5SSG8 566 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 ZAR1Q86SH2 424 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 A0A087X0K7 114 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 FOXA2Q9Y261 457 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-209ENST00000437951 TRGV3P03979 118 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 ZXDCQ2QGD7 858 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-209ENST00000437951 TEX43Q6ZNM6 134 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 FOXH1O75593 365 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 C16orf47Q6ZP98 133 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-209ENST00000437951 LINC01587Q99440 93 aa9.69□□□□□ -0.86
PTCH1-209ENST00000437951 IGHV3-72A0A0B4J1Y9 119 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 GAGE12JA6NER3 117 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 C9JAW5 83 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 GAGE7O76087 117 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 CXCL1P09341 107 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 CD7P09564 240 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 GAGE4Q13068 117 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 ACP7Q6ZNF0 438 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 C8orf46Q8TAG6 207 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 KLF14Q8TD94 323 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-209ENST00000437951 H3BTX0 84 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 LINC00271P0C7V0 271 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 CCL8P80075 99 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 PSG8Q9UQ74 426 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 GTSCR1Q86UQ5 136 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 SSC4DQ8WTU2 575 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 LTBP4Q8N2S1 1624 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 CMC4P56277 68 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-209ENST00000437951 GAGE5Q13069 117 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 GAGE6Q13070 117 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 PEAR1Q5VY43 1037 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-209ENST00000437951 IGHG4P01861 327 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 SRSF3P84103 164 aaKnown RBP9.68□□□□□ -0.86
PTCH1-209ENST00000437951 TMEM167AQ8TBQ9 72 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 HRKO00198 91 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 PYY3Q5JQD4 70 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 VGLL1Q99990 258 aa9.68□□□□□ -0.86
PTCH1-209ENST00000437951 K7EP34 96 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 VCYO14598 125 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 ZNF664Q8N3J9 261 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 FBXL7Q9UJT9 491 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 ADAMTS7Q9UKP4 1686 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 A0A0J9YW62 118 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 GAGE12HA6NDE8 117 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 PDLIM4P50479 330 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 TRGV2A0A075B6R0 118 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 PRR32B1ATL7 298 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 Q0VG73 95 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 LINC01590Q5TEZ4 76 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 GFI1BQ5VTD9 330 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 ZIC3O60481 467 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 NDUFS6O75380 124 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms