RNA–Protein interactions for RNA: ENST00000437002.5

MMS19-208, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

APPRIS ALT2 TSL 5

Gene MMS19, Length 933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-208	ENST00000437002	RND2	P52198	227 aa		12.82	□□□□□ -0.36
MMS19-208	ENST00000437002	DEFB1	P60022	68 aa		12.82	□□□□□ -0.36
MMS19-208	ENST00000437002	ARRDC1	Q8N5I2	433 aa		12.82	□□□□□ -0.36
MMS19-208	ENST00000437002	ABHD1	Q96SE0	405 aa		12.82	□□□□□ -0.36
MMS19-208	ENST00000437002	ENY2	Q9NPA8	101 aa		12.82	□□□□□ -0.36
MMS19-208	ENST00000437002	XCL2	Q9UBD3	114 aa		12.82	□□□□□ -0.36
MMS19-208	ENST00000437002	MTFP1	Q9UDX5	166 aa		12.82	□□□□□ -0.36
MMS19-208	ENST00000437002		H3BMM0	161 aa		12.81	□□□□□ -0.36
MMS19-208	ENST00000437002	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
MMS19-208	ENST00000437002	OR10J1	P30954	320 aa		12.81	□□□□□ -0.36
MMS19-208	ENST00000437002	SPCS3	P61009	180 aa		12.81	□□□□□ -0.36
MMS19-208	ENST00000437002	POM121L12	Q8N7R1	296 aa		12.81	□□□□□ -0.36
MMS19-208	ENST00000437002	OR1S2	Q8NGQ3	325 aa		12.81	□□□□□ -0.36
MMS19-208	ENST00000437002	MARCH1	Q8TCQ1	289 aa		12.81	□□□□□ -0.36
MMS19-208	ENST00000437002	RRNAD1	Q96FB5	475 aa	Known RBP	12.81	□□□□□ -0.36
MMS19-208	ENST00000437002	COPZ2	Q9P299	210 aa		12.81	□□□□□ -0.36
MMS19-208	ENST00000437002	TRAV30	A0A087WSZ9	112 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002		A0A087WXM4	84 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002		M0R2N4	97 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	ATG12	O94817	140 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	CDS2	O95674	445 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	CD74	P04233	296 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	OR5AC1	P0C628	307 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	YPEL3	P61236	119 aa	Predicted RBP	12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	C2orf83	Q53S99	150 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	GSG1L	Q6UXU4	331 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	OR52E5	Q8NH55	327 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	TERB2	Q8NHR7	220 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	GLYATL2	Q8WU03	294 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	GPR146	Q96CH1	333 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	NARS2	Q96I59	477 aa	Known RBP	12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	RTBDN	Q9BSG5	229 aa	Predicted RBP	12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	TMEM222	Q9H0R3	208 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	HSPG2	P98160	4391 aa		12.8	□□□□□ -0.36
MMS19-208	ENST00000437002	FAM25A	B3EWG3	89 aa		12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	FAM25C	B3EWG5	89 aa		12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	FAM25G	B3EWG6	89 aa		12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	BUB3	O43684	328 aa		12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	HTR2B	P41595	481 aa		12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	GDF5OS	Q5U4N7	250 aa		12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	FAAP20	Q6NZ36	180 aa		12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	SELENOH	Q8IZQ5	122 aa	Known RBP	12.79	□□□□□ -0.36
MMS19-208	ENST00000437002		Q8WTZ3	238 aa		12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	NAA50	Q9GZZ1	169 aa	Known RBP	12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	CACNG5	Q9UF02	275 aa		12.79	□□□□□ -0.36
MMS19-208	ENST00000437002	RPS10-NUDT3	A0A1W2PQS6	291 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	PRSS29P	A6NIE9	313 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	IL4	P05112	153 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	TBP	P20226	339 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	MEF2D	Q14814	521 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	SCGB2B2	Q4G0G5	96 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	CCDC71L	Q8N9Z2	235 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	RNASE11	Q8TAA1	199 aa	Known RBP	12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	ZFAND1	Q8TCF1	268 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	NPIPB3	Q92617	1050 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	NRN1	Q9NPD7	142 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	HEYL	Q9NQ87	328 aa	Predicted RBP	12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	EXTL2	Q9UBQ6	330 aa		12.78	□□□□□ -0.36
MMS19-208	ENST00000437002	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	ZNF705D	P0CH99	300 aa	Predicted RBP	12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	ZNF705B	P0CI00	300 aa	Predicted RBP	12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	SMIM18	P0DKX4	95 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002		P0DMU3	169 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	FAM231A	P0DMU4	169 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	FAM231C	P0DMU5	169 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	MED14OS	P0DP75	135 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	SLC25A4	P12235	298 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	HLA-DRB4	P13762	266 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	RORC	P51449	518 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	FAM219A	Q8IW50	185 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	TMEM229B	Q8NBD8	167 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	SLC24A4	Q8NFF2	622 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	NDUFAF3	Q9BU61	184 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	MRPS26	Q9BYN8	205 aa	Known RBP	12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	HLA-DRB4	X5D2U9	266 aa		12.77	□□□□□ -0.37
MMS19-208	ENST00000437002	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	SCGB2A1	O75556	95 aa		12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	RAB3D	O95716	219 aa		12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	TOMM40	O96008	361 aa		12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	EIF2B2	P49770	351 aa	Known RBP	12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	AP2S1	P53680	142 aa	Predicted RBP	12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	FXYD7	P58549	80 aa		12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	SIGLEC15	Q6ZMC9	328 aa		12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	RBPMS	Q93062	196 aa	Known RBP	12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	WDR12	Q9GZL7	423 aa	Known RBP	12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	MIXL1	Q9H2W2	232 aa		12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	NAA60	Q9H7X0	242 aa		12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	SEPSECS	Q9HD40	501 aa	Known RBP	12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	VCX3A	Q9NNX9	186 aa		12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	PRR13	Q9NZ81	148 aa		12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	PLA2G2E	Q9NZK7	142 aa		12.76	□□□□□ -0.37
MMS19-208	ENST00000437002	IGKV3-20	P01619	116 aa		12.75	□□□□□ -0.37
MMS19-208	ENST00000437002	RD3L	P0DJH9	198 aa		12.75	□□□□□ -0.37
MMS19-208	ENST00000437002	PSG1	P11464	419 aa		12.75	□□□□□ -0.37
MMS19-208	ENST00000437002	SNRPD3	P62318	126 aa	Known RBP	12.75	□□□□□ -0.37
MMS19-208	ENST00000437002	CTF1	Q16619	201 aa		12.75	□□□□□ -0.37
MMS19-208	ENST00000437002	TMEM268	Q5VZI3	342 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms