RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 JTBO76095 146 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 NDUFA7O95182 113 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 CFDP00746 253 aaPredicted RBP5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 IFNA5P01569 189 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 IGHG4P01861 327 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 CRYBA1P05813 215 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 HIST1H1BP16401 226 aaKnown RBP5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 C4BPBP20851 252 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 RHOGP84095 191 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 IFITM2Q01629 132 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 EXOSC2Q13868 293 aaKnown RBP5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 ZNF266Q14584 549 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 BAP18Q8IXM2 172 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 NECAP1Q8NC96 275 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 TMEM116Q8NCL8 245 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 STOML3Q8TAV4 291 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 NPIPB3Q92617 1050 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 GINS3Q9BRX5 216 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 GON7Q9BXV9 100 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 PARD6GQ9BYG4 376 aaPredicted RBP5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 WDR61Q9GZS3 305 aaKnown RBP5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 NPVFQ9HCQ7 196 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 LSM4Q9Y4Z0 139 aaKnown RBP5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 FLNBO75369 2602 aaKnown RBP5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 TEX15Q9BXT5 2789 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 IGKV1D-37A0A075B6S9 117 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 RPS10-NUDT3A0A1W2PQS6 291 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 SMCO3A2RU48 225 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 TMEM89A2RUT3 159 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 PSMB11A5LHX3 300 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 FAM223BA6NKX1 122 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 PRSS47A8MTI9 375 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 F5H697 171 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 CYB5BO43169 146 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 IGHV3-23P01764 117 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 TRGV3P03979 118 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 TPT1P13693 172 aaKnown RBP5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 FGF7P21781 194 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 ATP6V0CP27449 155 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 PSMB8P28062 276 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 RAB9AP51151 201 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 RND2P52198 227 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 RUNX1Q01196 453 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 ATP5G2Q06055 141 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 KIAA0141Q14154 515 aaPredicted RBP5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 C15orf32Q32M92 178 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 DGAT2L7PQ6IED9 249 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 ETFRF1Q6IPR1 90 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 BTNL8Q6UX41 500 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 LCNL1Q6ZST4 164 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 TMEM144Q7Z5S9 345 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 CENPVQ7Z7K6 275 aaPredicted RBP5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 FAM223AQ8IWN6 122 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 THAP8Q8NA92 274 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 HSD17B11Q8NBQ5 300 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 OR4X1Q8NH49 305 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 LINC01006Q8NI28 216 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 SCGB1C1Q8TD33 95 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 VN1R17PQ8TDU5 208 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 WIPF2Q8TF74 440 aaPredicted RBP5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 ACY3Q96HD9 319 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 SLC35E1Q96K37 410 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 MGST2Q99735 147 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 RSG1Q9BU20 258 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 SH3BGRL3Q9H299 93 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 THYN1Q9P016 225 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 CSPG4Q6UVK1 2322 aa5.45□□□□□ -1.54
LSM3P3-201ENST00000436601 ZNF469Q96JG9 3925 aaPredicted RBP5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 CELSR1Q9NYQ6 3014 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 MPDU1O75352 247 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 CLN5O75503 358 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 SPP1P10451 314 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 OR10J1P30954 320 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 MFAP4P55083 255 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 TIRAPP58753 221 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 TPPP2P59282 170 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 EIF5AP63241 154 aaKnown RBP5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 SLC35B1P78383 322 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 AKR1C1Q04828 323 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 FOXE3Q13461 319 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 FHL3Q13643 280 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 TCTEX1D4Q5JR98 221 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 ACSM6Q6P461 480 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 TEX38Q6PEX7 206 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 TEX261Q6UWH6 196 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 TMEM182Q6ZP80 229 aaPredicted RBP5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 KLHDC1Q8N7A1 406 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 ZNF680Q8NEM1 530 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 ZNF502Q8TBZ5 544 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 MYOZ3Q8TDC0 251 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 GNPNAT1Q96EK6 184 aaPredicted RBP5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 ZNF414Q96IQ9 312 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 USMG5Q96IX5 58 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 CXorf58Q96LI9 332 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 GGTLC1Q9BX51 225 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 NPCDR1Q9BY65 106 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 SLA2Q9H6Q3 261 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 C21orf62Q9NYP8 219 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 HIVEP1P15822 2718 aa5.44□□□□□ -1.54
LSM3P3-201ENST00000436601 SVEP1Q4LDE5 3571 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms