RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 IFNA7P01567 189 aa17.87■□□□□ 0.45
CPSF4-204ENST00000436336 IGHV3-23P01764 117 aa17.87■□□□□ 0.45
CPSF4-204ENST00000436336 OR10J1P30954 320 aa17.87■□□□□ 0.45
CPSF4-204ENST00000436336 ALKAL2Q6UX46 152 aa17.87■□□□□ 0.45
CPSF4-204ENST00000436336 TMED6Q8WW62 240 aa17.87■□□□□ 0.45
CPSF4-204ENST00000436336 TRGV9Q99603 122 aa17.87■□□□□ 0.45
CPSF4-204ENST00000436336 GAR1Q9NY12 217 aaKnown RBP17.87■□□□□ 0.45
CPSF4-204ENST00000436336 TCRBV4S1A1TA0A5B7 111 aa17.86■□□□□ 0.45
CPSF4-204ENST00000436336 IGLC1P0CG04 106 aa17.86■□□□□ 0.45
CPSF4-204ENST00000436336 SRSF2Q01130 221 aaKnown RBP17.86■□□□□ 0.45
CPSF4-204ENST00000436336 LCNL1Q6ZST4 164 aa17.86■□□□□ 0.45
CPSF4-204ENST00000436336 OR2G3Q8NGZ4 309 aa17.86■□□□□ 0.45
CPSF4-204ENST00000436336 KCNIP2Q9NS61 270 aa17.86■□□□□ 0.45
CPSF4-204ENST00000436336 RFNGQ9Y644 331 aa17.86■□□□□ 0.45
CPSF4-204ENST00000436336 SERF2P84101 59 aa17.86■□□□□ 0.45
CPSF4-204ENST00000436336 CYP2G1PQ6ZSU1 146 aa17.86■□□□□ 0.45
CPSF4-204ENST00000436336 OR5AU1Q8NGC0 362 aa17.86■□□□□ 0.45
CPSF4-204ENST00000436336 WIPF2Q8TF74 440 aaPredicted RBP17.86■□□□□ 0.45
CPSF4-204ENST00000436336 CCDC140Q96MF4 163 aa17.86■□□□□ 0.45
CPSF4-204ENST00000436336 SCGB2A1O75556 95 aa17.85■□□□□ 0.45
CPSF4-204ENST00000436336 RPL29P47914 159 aaKnown RBP17.85■□□□□ 0.45
CPSF4-204ENST00000436336 MYOZ3Q8TDC0 251 aa17.85■□□□□ 0.45
CPSF4-204ENST00000436336 SLC45A2Q9UMX9 530 aa17.85■□□□□ 0.45
CPSF4-204ENST00000436336 RPLP1P05386 114 aaKnown RBP17.84■□□□□ 0.45
CPSF4-204ENST00000436336 SELENOTP62341 195 aa17.84■□□□□ 0.45
CPSF4-204ENST00000436336 KIAA0141Q14154 515 aaPredicted RBP17.84■□□□□ 0.45
CPSF4-204ENST00000436336 OR2T8A6NH00 312 aa17.84■□□□□ 0.45
CPSF4-204ENST00000436336 ZNF90Q03938 601 aa17.84■□□□□ 0.45
CPSF4-204ENST00000436336 ZNF767PQ75MW2 155 aa17.84■□□□□ 0.45
CPSF4-204ENST00000436336 ZNF491Q8N8L2 437 aa17.84■□□□□ 0.45
CPSF4-204ENST00000436336 OR4X2Q8NGF9 303 aa17.84■□□□□ 0.45
CPSF4-204ENST00000436336 UBQLN2Q9UHD9 624 aa17.84■□□□□ 0.45
CPSF4-204ENST00000436336 PXMP4Q9Y6I8 212 aa17.84■□□□□ 0.45
CPSF4-204ENST00000436336 CLPSL1A2RUU4 121 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 CLEC3BP05452 202 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 GPR183P32249 361 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 PRR20EP86478 221 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 PRR20CP86479 221 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 PRR20DP86480 221 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 PRR20BP86481 221 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 PRR20AP86496 221 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 TIGITQ495A1 244 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 MIC13Q5XKP0 118 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 ZNF343Q6P1L6 599 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 CLEC19AQ6UXS0 136 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 TMEM182Q6ZP80 229 aaPredicted RBP17.83■□□□□ 0.44
CPSF4-204ENST00000436336 RNF114Q9Y508 228 aa17.83■□□□□ 0.44
CPSF4-204ENST00000436336 IGKV1-17P01599 117 aa17.82■□□□□ 0.44
CPSF4-204ENST00000436336 FABP1P07148 127 aa17.82■□□□□ 0.44
CPSF4-204ENST00000436336 CTSGP08311 255 aa17.82■□□□□ 0.44
CPSF4-204ENST00000436336 B2MP61769 119 aa17.82■□□□□ 0.44
CPSF4-204ENST00000436336 FAM209BQ5JX69 171 aa17.82■□□□□ 0.44
CPSF4-204ENST00000436336 STPG3Q8N7X2 389 aa17.82■□□□□ 0.44
CPSF4-204ENST00000436336 BPIFCQ8NFQ6 507 aa17.82■□□□□ 0.44
CPSF4-204ENST00000436336 UBE2E2Q96LR5 201 aa17.82■□□□□ 0.44
CPSF4-204ENST00000436336 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.81■□□□□ 0.44
CPSF4-204ENST00000436336 RGS13O14921 159 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 NUPL2O15504 423 aaKnown RBP17.81■□□□□ 0.44
CPSF4-204ENST00000436336 TSPAN15O95858 294 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 IGHV3-11P01762 117 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 YPEL3P61236 119 aaPredicted RBP17.81■□□□□ 0.44
CPSF4-204ENST00000436336 FFAR4Q5NUL3 377 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 PLA2G2EQ9NZK7 142 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 TEP1Q99973 2627 aaKnown RBP17.81■□□□□ 0.44
CPSF4-204ENST00000436336 UMAD1C9J7I0 102 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 TGOLN2O43493 480 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 LINC00869P0C866 280 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 GATA2P23769 480 aaPredicted RBP17.81■□□□□ 0.44
CPSF4-204ENST00000436336 SULT1A2P50226 295 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 FAM74A1Q5RGS3 127 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 SLC39A9Q9NUM3 307 aa17.81■□□□□ 0.44
CPSF4-204ENST00000436336 A0A1B0GUS0 222 aa17.8■□□□□ 0.44
CPSF4-204ENST00000436336 ELLP55199 621 aaPredicted RBP17.8■□□□□ 0.44
CPSF4-204ENST00000436336 PROK1P58294 105 aa17.8■□□□□ 0.44
CPSF4-204ENST00000436336 ZNF616Q08AN1 781 aa17.8■□□□□ 0.44
CPSF4-204ENST00000436336 AKR1C8PQ5T2L2 129 aa17.8■□□□□ 0.44
CPSF4-204ENST00000436336 SPSB3Q6PJ21 355 aa17.8■□□□□ 0.44
CPSF4-204ENST00000436336 TOMM40O96008 361 aa17.79■□□□□ 0.44
CPSF4-204ENST00000436336 MBP02144 154 aa17.79■□□□□ 0.44
CPSF4-204ENST00000436336 ADMP35318 185 aa17.79■□□□□ 0.44
CPSF4-204ENST00000436336 RAB5CP51148 216 aa17.79■□□□□ 0.44
CPSF4-204ENST00000436336 TCTEX1D4Q5JR98 221 aa17.79■□□□□ 0.44
CPSF4-204ENST00000436336 Q6ZRG5 221 aa17.79■□□□□ 0.44
CPSF4-204ENST00000436336 RNF141Q8WVD5 230 aa17.79■□□□□ 0.44
CPSF4-204ENST00000436336 CHRDL1Q9BU40 450 aa17.79■□□□□ 0.44
CPSF4-204ENST00000436336 HAX1O00165 279 aa17.78■□□□□ 0.44
CPSF4-204ENST00000436336 RD3LP0DJH9 198 aa17.78■□□□□ 0.44
CPSF4-204ENST00000436336 PSG1P11464 419 aa17.78■□□□□ 0.44
CPSF4-204ENST00000436336 C2CD3Q4AC94 2353 aa17.78■□□□□ 0.44
CPSF4-204ENST00000436336 YIF1AO95070 293 aa17.78■□□□□ 0.44
CPSF4-204ENST00000436336 ARL3P36405 182 aa17.78■□□□□ 0.44
CPSF4-204ENST00000436336 ACOT6Q3I5F7 207 aaPredicted RBP17.78■□□□□ 0.44
CPSF4-204ENST00000436336 TMEM41BQ5BJD5 291 aa17.78■□□□□ 0.44
CPSF4-204ENST00000436336 VSIRQ9H7M9 311 aa17.78■□□□□ 0.44
CPSF4-204ENST00000436336 GNB4Q9HAV0 340 aa17.78■□□□□ 0.44
CPSF4-204ENST00000436336 LGALS1P09382 135 aaKnown RBP17.77■□□□□ 0.44
CPSF4-204ENST00000436336 M6PRP20645 277 aa17.77■□□□□ 0.44
CPSF4-204ENST00000436336 CDX1P47902 265 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-204ENST00000436336 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-204ENST00000436336 OR51G1Q8NGK1 321 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms