RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 OR1P1Q8NH06 330 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 OR5R1Q8NH85 324 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 SNRNP40Q96DI7 357 aaKnown RBP6□□□□□ -1.45
COL17A1-204ENST00000433822 SMIM12Q96EX1 92 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 PACRGQ96M98 296 aaPredicted RBP6□□□□□ -1.45
COL17A1-204ENST00000433822 PATZ1Q9HBE1 687 aaKnown RBP6□□□□□ -1.45
COL17A1-204ENST00000433822 DYNLRB1Q9NP97 96 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 GSN-AS1Q9NRJ2 163 aa6□□□□□ -1.45
COL17A1-204ENST00000433822 TNCP24821 2201 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 ANKHD1Q8IWZ3 2542 aaKnown RBP5.99□□□□□ -1.45
COL17A1-204ENST00000433822 PRRC2CQ9Y520 2896 aaKnown RBP5.99□□□□□ -1.45
COL17A1-204ENST00000433822 ARFGEF3Q5TH69 2177 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 TRBV20OR9-2A0A075B6H5 130 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 IGHV1-69-2A0A0G2JMI3 117 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 HMGB3O15347 200 aaKnown RBP5.99□□□□□ -1.45
COL17A1-204ENST00000433822 FCN3O75636 299 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 IGLV1-47P01700 117 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 IGLV2-23P01705 113 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 CRYGCP07315 174 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 CD3EP07766 207 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 SOD3P08294 240 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 IGHV1-8P0DP01 117 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 CA7P43166 264 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 TAS2R60P59551 318 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 RPL15P61313 204 aaKnown RBP5.99□□□□□ -1.45
COL17A1-204ENST00000433822 KIR3DS1Q14943 382 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 PYY3Q5JQD4 70 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 UTF1Q5T230 341 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 FAM78BQ5VT40 261 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 TGIF2LXQ8IUE1 241 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 MMD2Q8IY49 270 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 OR10G8Q8NGN5 311 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 SSMEM1Q8WWF3 244 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 LEAP2Q969E1 77 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 WFIKKN1Q96NZ8 548 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 SLC25A33Q9BSK2 321 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 TMEM133Q9H2Q1 129 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 ZNF430Q9H8G1 570 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-204ENST00000433822 SEPSECSQ9HD40 501 aaKnown RBP5.99□□□□□ -1.45
COL17A1-204ENST00000433822 OSTCQ9NRP0 149 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 IL36BQ9NZH7 164 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 CTSZQ9UBR2 303 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 MIOXQ9UGB7 285 aa5.99□□□□□ -1.45
COL17A1-204ENST00000433822 AMMECR1Q9Y4X0 333 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-204ENST00000433822 YTHDF2Q9Y5A9 579 aaKnown RBP5.99□□□□□ -1.45
COL17A1-204ENST00000433822 IGKV1OR2-108A0A075B7D4 117 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 A0A1W2PPQ1 181 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 TCRBV4S1A1TA0A5B7 111 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 PCP4L1A6NKN8 68 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 ISLRO14498 428 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 IGHV3-7P01780 117 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 MT-ND6P03923 174 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 CRYGBP07316 175 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 RNF224P0DH78 156 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 CCL3L1P16619 93 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 CHRNB4P30926 498 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 OR10J1P30954 320 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 PRRX1P54821 245 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 BPIFB3P59826 476 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 PLP1P60201 277 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 RPS16P62249 146 aaKnown RBP5.98□□□□□ -1.45
COL17A1-204ENST00000433822 JOSD1Q15040 202 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-204ENST00000433822 RASL11AQ6T310 242 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 C11orf42Q8N5U0 333 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 ST6GALNAC3Q8NDV1 305 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 EAF1Q96JC9 268 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-204ENST00000433822 TRGV9Q99603 122 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 HIST1H2BLQ99880 126 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 DCAF16Q9NXF7 216 aa5.98□□□□□ -1.45
COL17A1-204ENST00000433822 YLPM1P49750 1951 aaKnown RBP5.98□□□□□ -1.45
COL17A1-204ENST00000433822 AKAP9Q99996 3911 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 CGB1A6NKQ9 187 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 GATCO43716 136 aaKnown RBP5.97□□□□□ -1.45
COL17A1-204ENST00000433822 GCGP01275 180 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 ESDP10768 282 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 DEFA4P12838 97 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 PAX1P15863 534 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 CNN1P51911 297 aaKnown RBP5.97□□□□□ -1.45
COL17A1-204ENST00000433822 UBE2G2P60604 165 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 PSG5Q15238 335 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 ZNF841Q6ZN19 808 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 FAM231DQ6ZW35 169 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 MIR17HGQ75NE6 70 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 ZCCHC24Q8N2G6 241 aaKnown RBP5.97□□□□□ -1.45
COL17A1-204ENST00000433822 TMEM116Q8NCL8 245 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 LY6G5BQ8NDX9 201 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 OR10D4PQ8NGN7 298 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 OCC1Q8TAD7 63 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 C22orf15Q8WYQ4 148 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 H1FXQ92522 213 aaKnown RBP5.97□□□□□ -1.45
COL17A1-204ENST00000433822 CCL17Q92583 94 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 TMEM18Q96B42 140 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 ZNF503Q96F45 646 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 FAM167A-AS1Q96KT0 104 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 RBM14Q96PK6 669 aaKnown RBP5.97□□□□□ -1.45
COL17A1-204ENST00000433822 CHRDL1Q9BU40 450 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 ELOVL1Q9BW60 279 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 GPR61Q9BZJ8 451 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 DNAJC4Q9NNZ3 241 aa5.97□□□□□ -1.45
COL17A1-204ENST00000433822 CDC42EP3Q9UKI2 254 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms