RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 A6NDN8 102 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 GPR183P32249 361 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 MIR17HGQ75NE6 70 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 GGTLC1Q9BX51 225 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-208ENST00000430669 TIMM23O14925 209 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 OSTCQ9NRP0 149 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 E7EQL1 145 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 WNT2P09544 360 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 NUTF2P61970 127 aaKnown RBP9.48□□□□□ -0.89
PTCH1-208ENST00000430669 COPS9Q8WXC6 57 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 ASCL2Q99929 193 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 RSPO1Q2MKA7 263 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-208ENST00000430669 VN1R17PQ8TDU5 208 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 SMIM12Q96EX1 92 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 C9JCJ5 164 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 NDUFS6O75380 124 aaKnown RBP9.48□□□□□ -0.89
PTCH1-208ENST00000430669 VAMP3Q15836 100 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 OR8A1Q8NGG7 326 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 IGLV3-9A0A075B6K5 115 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 ATP5L2Q7Z4Y8 100 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 ZNF383Q8NA42 475 aa9.48□□□□□ -0.89
PTCH1-208ENST00000430669 BTF3P20290 206 aaKnown RBP9.47□□□□□ -0.89
PTCH1-208ENST00000430669 ZNF833PQ6ZTB9 187 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 C11orf42Q8N5U0 333 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 C8orf31Q8N9H6 132 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 PMCHL2Q9BQD1 86 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 CDKN1AP38936 164 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 RRN3P1Q2M238 152 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 FAM159AQ6UWV7 190 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 C1QL4Q86Z23 238 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 GNB1LQ9BYB4 327 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 LEPROTL1O95214 131 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-208ENST00000430669 PRSS22Q9GZN4 317 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 LY96Q9Y6Y9 160 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 DPRXA6NFQ7 191 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 RPL23P62829 140 aaKnown RBP9.47□□□□□ -0.89
PTCH1-208ENST00000430669 CRIM1Q9NZV1 1036 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 FAM223BA6NKX1 122 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 WISP1O95388 367 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 WFDC3Q8IUB2 231 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 FAM223AQ8IWN6 122 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 LINC00311Q8N616 119 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 HSPB9Q9BQS6 159 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 LINC00473A8K010 186 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 NPIPB6E9PJ23 425 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 IGHV3-48P01763 117 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 LYPD1Q8N2G4 141 aa9.47□□□□□ -0.89
PTCH1-208ENST00000430669 AREGP15514 252 aa9.46□□□□□ -0.89
PTCH1-208ENST00000430669 DUX5Q96PT3 197 aa9.46□□□□□ -0.89
PTCH1-208ENST00000430669 METRNQ9UJH8 293 aa9.46□□□□□ -0.89
PTCH1-208ENST00000430669 ANKHD1Q8IWZ3 2542 aaKnown RBP9.46□□□□□ -0.89
PTCH1-208ENST00000430669 LOC389332A0A1B0GUA5 103 aa9.46□□□□□ -0.89
PTCH1-208ENST00000430669 TMSB15BA0A087X1C1 80 aa9.46□□□□□ -0.89
PTCH1-208ENST00000430669 NUDT3O95989 172 aa9.46□□□□□ -0.89
PTCH1-208ENST00000430669 SRIP30626 198 aa9.46□□□□□ -0.89
PTCH1-208ENST00000430669 OR4X2Q8NGF9 303 aa9.46□□□□□ -0.89
PTCH1-208ENST00000430669 USMG5Q96IX5 58 aa9.46□□□□□ -0.89
PTCH1-208ENST00000430669 RNF144BQ7Z419 303 aa9.46□□□□□ -0.9
PTCH1-208ENST00000430669 EAF1Q96JC9 268 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-208ENST00000430669 TMEM70Q9BUB7 260 aa9.46□□□□□ -0.9
PTCH1-208ENST00000430669 EPDR1Q9UM22 224 aa9.46□□□□□ -0.9
PTCH1-208ENST00000430669 B4DSR2 109 aa9.46□□□□□ -0.9
PTCH1-208ENST00000430669 C5orf64Q2M2E5 130 aa9.46□□□□□ -0.9
PTCH1-208ENST00000430669 OR4C5Q8NGB2 326 aa9.46□□□□□ -0.9
PTCH1-208ENST00000430669 DDB2Q92466 427 aa9.46□□□□□ -0.9
PTCH1-208ENST00000430669 H7C1H1 209 aa9.46□□□□□ -0.9
PTCH1-208ENST00000430669 GTF2H5Q6ZYL4 71 aa9.46□□□□□ -0.9
PTCH1-208ENST00000430669 ZCCHC24Q8N2G6 241 aaKnown RBP9.46□□□□□ -0.9
PTCH1-208ENST00000430669 SIGLEC9Q9Y336 463 aa9.46□□□□□ -0.9
PTCH1-208ENST00000430669 TMEM238LA0A1B0GVL6 79 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 A6NJY4 79 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 SLX1AQ9BQ83 275 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 ZFHX2Q9C0A1 2572 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-208ENST00000430669 PTPRQQ9UMZ3 2332 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 STAG3L2P0CL84 134 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 STAG3L3P0CL85 134 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 KAAG1Q9UBP8 84 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 SLC25A16P16260 332 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 ATP5G3P48201 142 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 CLEC19AQ6UXS0 136 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 PAM16Q9Y3D7 125 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 TCAPO15273 167 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 RHOGP84095 191 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 PRSS33Q8NF86 280 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 HIGD1CA8MV81 97 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 CACNG7P62955 275 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 TBX15Q96SF7 602 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 FOXI3A8MTJ6 420 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-208ENST00000430669 NTF4P34130 210 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 TCF15Q12870 199 aa9.45□□□□□ -0.9
PTCH1-208ENST00000430669 F11RQ9Y624 299 aaKnown RBP9.45□□□□□ -0.9
PTCH1-208ENST00000430669 PAPPA-AS1Q5QFB9 102 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 KIR3DL3Q8N743 410 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 KIR2DL4Q99706 377 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 REG4Q9BYZ8 158 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 UQCR10Q9UDW1 63 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms