RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 ENY2Q9NPA8 101 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 HEYLQ9NQ87 328 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-203ENST00000430038 DISC1C4P0D8 188 aa12.43□□□□□ -0.42
CPSF4-203ENST00000430038 CD5P06127 495 aa12.43□□□□□ -0.42
CPSF4-203ENST00000430038 ZNF688P0C7X2 276 aa12.43□□□□□ -0.42
CPSF4-203ENST00000430038 C4BPBP20851 252 aa12.43□□□□□ -0.42
CPSF4-203ENST00000430038 HTR2BP41595 481 aa12.43□□□□□ -0.42
CPSF4-203ENST00000430038 MRPS10P82664 201 aaKnown RBP12.43□□□□□ -0.42
CPSF4-203ENST00000430038 DHODHQ02127 395 aa12.43□□□□□ -0.42
CPSF4-203ENST00000430038 USF2Q15853 346 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-203ENST00000430038 TRPT1Q86TN4 253 aaKnown RBP12.43□□□□□ -0.42
CPSF4-203ENST00000430038 METTL26Q96S19 204 aa12.43□□□□□ -0.42
CPSF4-203ENST00000430038 SLIRPQ9GZT3 109 aaKnown RBP12.43□□□□□ -0.42
CPSF4-203ENST00000430038 GSTZ1O43708 216 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-203ENST00000430038 RBMY1A1P0DJD3 496 aaKnown RBP12.42□□□□□ -0.42
CPSF4-203ENST00000430038 RBMY1CP0DJD4 496 aa12.42□□□□□ -0.42
CPSF4-203ENST00000430038 RBMY1FQ15415 496 aaKnown RBP12.42□□□□□ -0.42
CPSF4-203ENST00000430038 NMSQ5H8A3 153 aa12.42□□□□□ -0.42
CPSF4-203ENST00000430038 GSG1LQ6UXU4 331 aa12.42□□□□□ -0.42
CPSF4-203ENST00000430038 LYZL2Q7Z4W2 148 aa12.42□□□□□ -0.42
CPSF4-203ENST00000430038 Q8NAQ8 132 aa12.42□□□□□ -0.42
CPSF4-203ENST00000430038 GLMPQ8WWB7 406 aa12.42□□□□□ -0.42
CPSF4-203ENST00000430038 C11orf68Q9H3H3 251 aaKnown RBP12.42□□□□□ -0.42
CPSF4-203ENST00000430038 OR10J1P30954 320 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 TNFSF8P32971 234 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 PRR20EP86478 221 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 PRR20CP86479 221 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 PRR20DP86480 221 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 PRR20BP86481 221 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 PRR20AP86496 221 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 C16orf54Q6UWD8 224 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 SLC24A4Q8NFF2 622 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 C11orf45Q8TAV5 145 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 NPIPB3Q92617 1050 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 CCDC59Q9P031 241 aaKnown RBP12.41□□□□□ -0.42
CPSF4-203ENST00000430038 FBXL17Q9UF56 701 aa12.41□□□□□ -0.42
CPSF4-203ENST00000430038 KLK5Q9Y337 293 aaPredicted RBP12.41□□□□□ -0.42
CPSF4-203ENST00000430038 TRAV30A0A087WSZ9 112 aa12.4□□□□□ -0.42
CPSF4-203ENST00000430038 A0A1W2PS18 150 aa12.4□□□□□ -0.42
CPSF4-203ENST00000430038 CEBPZOSA8MTT3 80 aa12.4□□□□□ -0.42
CPSF4-203ENST00000430038 YPEL3P61236 119 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-203ENST00000430038 STHQ8IWL8 128 aa12.4□□□□□ -0.42
CPSF4-203ENST00000430038 TMEM217Q8N7C4 229 aa12.4□□□□□ -0.42
CPSF4-203ENST00000430038 CSNK1G2-AS1Q8NCQ2 148 aa12.4□□□□□ -0.42
CPSF4-203ENST00000430038 RNASEH2CQ8TDP1 164 aaKnown RBP12.4□□□□□ -0.42
CPSF4-203ENST00000430038 GRAMD2BQ96HH9 432 aa12.4□□□□□ -0.42
CPSF4-203ENST00000430038 TMEM231Q9H6L2 316 aa12.4□□□□□ -0.42
CPSF4-203ENST00000430038 X6R8D5 127 aa12.4□□□□□ -0.42
CPSF4-203ENST00000430038 H3BMQ9 156 aa12.39□□□□□ -0.43
CPSF4-203ENST00000430038 TMBIM6P55061 237 aa12.39□□□□□ -0.43
CPSF4-203ENST00000430038 OR1S2Q8NGQ3 325 aa12.39□□□□□ -0.43
CPSF4-203ENST00000430038 RAB2BQ8WUD1 216 aa12.39□□□□□ -0.43
CPSF4-203ENST00000430038 PRRT1Q99946 306 aa12.39□□□□□ -0.43
CPSF4-203ENST00000430038 RBKSQ9H477 322 aa12.39□□□□□ -0.43
CPSF4-203ENST00000430038 CLEC5AQ9NY25 188 aa12.39□□□□□ -0.43
CPSF4-203ENST00000430038 IGKV1D-37A0A075B6S9 117 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 ELOA3CA0A087WX78 387 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-203ENST00000430038 IGHV4-28A0A0C4DH34 117 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 IL4P05112 153 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 HNRNPCP07910 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
CPSF4-203ENST00000430038 SULT1A3P0DMM9 295 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 SULT1A4P0DMN0 295 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 SLC25A4P12235 298 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 AKR1C4P17516 323 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 NPY1RP25929 384 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 DEFB1P60022 68 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 DHRS2Q13268 280 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 ACTL10Q5JWF8 245 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 Q8WTZ3 238 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 IL22RA2Q969J5 263 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 ACY3Q96HD9 319 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 RAB40CQ96S21 281 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 HSPB7Q9UBY9 170 aa12.38□□□□□ -0.43
CPSF4-203ENST00000430038 RPS10-NUDT3A0A1W2PQS6 291 aa12.37□□□□□ -0.43
CPSF4-203ENST00000430038 BUB3O43684 328 aa12.37□□□□□ -0.43
CPSF4-203ENST00000430038 PSG1P11464 419 aa12.37□□□□□ -0.43
CPSF4-203ENST00000430038 LGALS9CQ6DKI2 356 aa12.37□□□□□ -0.43
CPSF4-203ENST00000430038 ZNF705EA8MWA4 302 aaPredicted RBP12.36□□□□□ -0.43
CPSF4-203ENST00000430038 TOMM40O96008 361 aa12.36□□□□□ -0.43
CPSF4-203ENST00000430038 KLF9Q13886 244 aaPredicted RBP12.36□□□□□ -0.43
CPSF4-203ENST00000430038 PSMG4Q5JS54 123 aa12.36□□□□□ -0.43
CPSF4-203ENST00000430038 OR51G1Q8NGK1 321 aa12.36□□□□□ -0.43
CPSF4-203ENST00000430038 TRIM63Q969Q1 353 aa12.36□□□□□ -0.43
CPSF4-203ENST00000430038 MCUBQ9NWR8 336 aa12.36□□□□□ -0.43
CPSF4-203ENST00000430038 APLNQ9ULZ1 77 aa12.36□□□□□ -0.43
CPSF4-203ENST00000430038 KCNIP3Q9Y2W7 256 aa12.36□□□□□ -0.43
CPSF4-203ENST00000430038 A0A0B4J2A0 478 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 FABP12A6NFH5 140 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 FAM90A26D6RGX4 464 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 PITX3O75364 302 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 IFNA10P01566 189 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 RD3LP0DJH9 198 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 CCR6P51684 374 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 ZNF90Q03938 601 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 GAMTQ14353 236 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 SMCO1Q147U7 214 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 DTD1Q8TEA8 209 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 BCL7BQ9BQE9 202 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 RSL24D1Q9UHA3 163 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms