RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	KCNIP3	Q9Y2W7	256 aa		13.02	□□□□□ -0.33
MRPL28-203	ENST00000429738		A0A1W2PS18	150 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	NOL3	O60936	208 aa	Known RBP	13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	SCGB2A1	O75556	95 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	SULT1A3	P0DMM9	295 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	SULT1A4	P0DMN0	295 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	SLC25A4	P12235	298 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	TIGIT	Q495A1	244 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	FAM24B	Q8N5W8	94 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	MCFD2	Q8NI22	146 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	METTL26	Q96S19	204 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	PRR13	Q9NZ81	148 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	CACFD1	Q9UGQ2	172 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738		U3KQE9	123 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738	AGRN	O00468	2067 aa		13.01	□□□□□ -0.33
MRPL28-203	ENST00000429738		A0A0B4J2A0	478 aa		13	□□□□□ -0.33
MRPL28-203	ENST00000429738	CEBPZOS	A8MTT3	80 aa		13	□□□□□ -0.33
MRPL28-203	ENST00000429738	MPTX1	A8MV57	137 aa		13	□□□□□ -0.33
MRPL28-203	ENST00000429738	DNASE2	O00115	360 aa	Predicted RBP	13	□□□□□ -0.33
MRPL28-203	ENST00000429738	RPP25L	Q8N5L8	163 aa	Known RBP	13	□□□□□ -0.33
MRPL28-203	ENST00000429738	OR1S2	Q8NGQ3	325 aa		13	□□□□□ -0.33
MRPL28-203	ENST00000429738	GATAD1	Q8WUU5	269 aa		13	□□□□□ -0.33
MRPL28-203	ENST00000429738	TRIM63	Q969Q1	353 aa		13	□□□□□ -0.33
MRPL28-203	ENST00000429738	MCUB	Q9NWR8	336 aa		13	□□□□□ -0.33
MRPL28-203	ENST00000429738	SHPK	Q9UHJ6	478 aa		13	□□□□□ -0.33
MRPL28-203	ENST00000429738	KLK5	Q9Y337	293 aa	Predicted RBP	13	□□□□□ -0.33
MRPL28-203	ENST00000429738		K7EQG2	157 aa		12.99	□□□□□ -0.33
MRPL28-203	ENST00000429738	NPY1R	P25929	384 aa		12.99	□□□□□ -0.33
MRPL28-203	ENST00000429738	P2RY1	P47900	373 aa		12.99	□□□□□ -0.33
MRPL28-203	ENST00000429738	RND2	P52198	227 aa		12.99	□□□□□ -0.33
MRPL28-203	ENST00000429738	DEFB131A	P59861	70 aa		12.99	□□□□□ -0.33
MRPL28-203	ENST00000429738	YPEL3	P61236	119 aa	Predicted RBP	12.99	□□□□□ -0.33
MRPL28-203	ENST00000429738	KLF9	Q13886	244 aa	Predicted RBP	12.99	□□□□□ -0.33
MRPL28-203	ENST00000429738	LYZL2	Q7Z4W2	148 aa		12.99	□□□□□ -0.33
MRPL28-203	ENST00000429738	HSPB7	Q9UBY9	170 aa		12.99	□□□□□ -0.33
MRPL28-203	ENST00000429738	NXPH3	O95157	252 aa		12.98	□□□□□ -0.33
MRPL28-203	ENST00000429738	CCR6	P51684	374 aa		12.98	□□□□□ -0.33
MRPL28-203	ENST00000429738	RPL11	P62913	178 aa	Known RBP	12.98	□□□□□ -0.33
MRPL28-203	ENST00000429738	RBMS2	Q15434	407 aa	Known RBP	12.98	□□□□□ -0.33
MRPL28-203	ENST00000429738	LEMD1	Q68G75	181 aa		12.98	□□□□□ -0.33
MRPL28-203	ENST00000429738	ETFRF1	Q6IPR1	90 aa		12.98	□□□□□ -0.33
MRPL28-203	ENST00000429738	DCANP1	Q8TF63	244 aa		12.98	□□□□□ -0.33
MRPL28-203	ENST00000429738	GRAMD2B	Q96HH9	432 aa		12.98	□□□□□ -0.33
MRPL28-203	ENST00000429738		V9GYH0	126 aa		12.98	□□□□□ -0.33
MRPL28-203	ENST00000429738	AKR1C4	P17516	323 aa		12.97	□□□□□ -0.33
MRPL28-203	ENST00000429738	OR10J1	P30954	320 aa		12.97	□□□□□ -0.33
MRPL28-203	ENST00000429738	SMCO1	Q147U7	214 aa		12.97	□□□□□ -0.33
MRPL28-203	ENST00000429738	NOXA1	Q86UR1	476 aa		12.97	□□□□□ -0.33
MRPL28-203	ENST00000429738	LGI3	Q8N145	548 aa		12.97	□□□□□ -0.33
MRPL28-203	ENST00000429738	TMEM217	Q8N7C4	229 aa		12.97	□□□□□ -0.33
MRPL28-203	ENST00000429738		Q8WTZ3	238 aa		12.97	□□□□□ -0.33
MRPL28-203	ENST00000429738	RARRES2	Q99969	163 aa		12.97	□□□□□ -0.33
MRPL28-203	ENST00000429738	RABAC1	Q9UI14	185 aa		12.97	□□□□□ -0.33
MRPL28-203	ENST00000429738		U3KQ87	197 aa		12.97	□□□□□ -0.33
MRPL28-203	ENST00000429738	HECTD4	Q9Y4D8	3996 aa		12.96	□□□□□ -0.33
MRPL28-203	ENST00000429738	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
MRPL28-203	ENST00000429738	ANXA3	P12429	323 aa		12.96	□□□□□ -0.33
MRPL28-203	ENST00000429738	FAU	P35544	74 aa	Known RBP	12.96	□□□□□ -0.33
MRPL28-203	ENST00000429738	SRPX	P78539	464 aa		12.96	□□□□□ -0.33
MRPL28-203	ENST00000429738	ZNF79	Q15937	498 aa		12.96	□□□□□ -0.33
MRPL28-203	ENST00000429738	STXBP6	Q8NFX7	210 aa		12.96	□□□□□ -0.33
MRPL28-203	ENST00000429738	GLMP	Q8WWB7	406 aa		12.96	□□□□□ -0.33
MRPL28-203	ENST00000429738	NPIPB3	Q92617	1050 aa		12.96	□□□□□ -0.33
MRPL28-203	ENST00000429738	NARS2	Q96I59	477 aa	Known RBP	12.96	□□□□□ -0.33
MRPL28-203	ENST00000429738	TOMM40	O96008	361 aa		12.95	□□□□□ -0.34
MRPL28-203	ENST00000429738	CA1	P00915	261 aa	Predicted RBP	12.95	□□□□□ -0.34
MRPL28-203	ENST00000429738	AP3S2	P59780	193 aa		12.95	□□□□□ -0.34
MRPL28-203	ENST00000429738	USF2	Q15853	346 aa	Predicted RBP	12.95	□□□□□ -0.34
MRPL28-203	ENST00000429738	C16orf54	Q6UWD8	224 aa		12.95	□□□□□ -0.34
MRPL28-203	ENST00000429738	TOMM5	Q8N4H5	51 aa		12.95	□□□□□ -0.34
MRPL28-203	ENST00000429738	DTD1	Q8TEA8	209 aa		12.95	□□□□□ -0.34
MRPL28-203	ENST00000429738	DEDD2	Q8WXF8	326 aa		12.95	□□□□□ -0.34
MRPL28-203	ENST00000429738	C11orf68	Q9H3H3	251 aa	Known RBP	12.95	□□□□□ -0.34
MRPL28-203	ENST00000429738	RBKS	Q9H477	322 aa		12.95	□□□□□ -0.34
MRPL28-203	ENST00000429738	DUXB	A0A1W2PPF3	345 aa		12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	PITX3	O75364	302 aa		12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	IFNA10	P01566	189 aa		12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	IL4	P05112	153 aa		12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	ATP5I	P56385	69 aa	Predicted RBP	12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	TMEM128	Q5BJH2	165 aa		12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	LGALS9C	Q6DKI2	356 aa		12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	TRPT1	Q86TN4	253 aa	Known RBP	12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	STH	Q8IWL8	128 aa		12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	LRTM2	Q8N967	370 aa		12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	OR11H2	Q8NH07	326 aa		12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	RBM38	Q9H0Z9	239 aa	Known RBP	12.94	□□□□□ -0.34
MRPL28-203	ENST00000429738	VPS13D	Q5THJ4	4388 aa		12.93	□□□□□ -0.34
MRPL28-203	ENST00000429738	PIGBOS1	A0A0B4J2F0	54 aa		12.93	□□□□□ -0.34
MRPL28-203	ENST00000429738	HELT	A6NFD8	242 aa		12.93	□□□□□ -0.34
MRPL28-203	ENST00000429738	DEDD	O75618	318 aa		12.93	□□□□□ -0.34
MRPL28-203	ENST00000429738	GIG44	P09565	113 aa	Predicted RBP	12.93	□□□□□ -0.34
MRPL28-203	ENST00000429738	ZNF688	P0C7X2	276 aa		12.93	□□□□□ -0.34
MRPL28-203	ENST00000429738	PYDC2	Q56P42	97 aa		12.93	□□□□□ -0.34
MRPL28-203	ENST00000429738	CCDC190	Q86UF4	302 aa		12.93	□□□□□ -0.34
MRPL28-203	ENST00000429738	ACY3	Q96HD9	319 aa		12.93	□□□□□ -0.34
MRPL28-203	ENST00000429738	BUB3	O43684	328 aa		12.92	□□□□□ -0.34
MRPL28-203	ENST00000429738	RD3L	P0DJH9	198 aa		12.92	□□□□□ -0.34
MRPL28-203	ENST00000429738	PSG1	P11464	419 aa		12.92	□□□□□ -0.34
MRPL28-203	ENST00000429738	EIF2B2	P49770	351 aa	Known RBP	12.92	□□□□□ -0.34
MRPL28-203	ENST00000429738	AP2S1	P53680	142 aa	Predicted RBP	12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms