RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 LSM4Q9Y4Z0 139 aaKnown RBP13.22□□□□□ -0.29
LINC00887-203ENST00000429578 GNG7O60262 68 aa13.21□□□□□ -0.3
LINC00887-203ENST00000429578 IGHV3-11P01762 117 aa13.21□□□□□ -0.3
LINC00887-203ENST00000429578 THAP8Q8NA92 274 aa13.21□□□□□ -0.3
LINC00887-203ENST00000429578 ZNF471Q9BX82 626 aaPredicted RBP13.21□□□□□ -0.3
LINC00887-203ENST00000429578 MPDU1O75352 247 aa13.2□□□□□ -0.3
LINC00887-203ENST00000429578 CD28P10747 220 aa13.2□□□□□ -0.3
LINC00887-203ENST00000429578 CDX1P47902 265 aaPredicted RBP13.2□□□□□ -0.3
LINC00887-203ENST00000429578 FAM209BQ5JX69 171 aa13.2□□□□□ -0.3
LINC00887-203ENST00000429578 BTNL8Q6UX41 500 aa13.2□□□□□ -0.3
LINC00887-203ENST00000429578 CLEC19AQ6UXS0 136 aa13.2□□□□□ -0.3
LINC00887-203ENST00000429578 SCGB1C1Q8TD33 95 aa13.2□□□□□ -0.3
LINC00887-203ENST00000429578 WFDC12Q8WWY7 111 aa13.2□□□□□ -0.3
LINC00887-203ENST00000429578 IGKV1D-37A0A075B6S9 117 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 TRAV30A0A087WSZ9 112 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 ZFP92A6NM28 416 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 CLEC3BP05452 202 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 FGF7P21781 194 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 GPR183P32249 361 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 GNB4Q9HAV0 340 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.19□□□□□ -0.3
LINC00887-203ENST00000429578 TCRBV4S1A1TA0A5B7 111 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 OR2T8A6NH00 312 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 CTSGP08311 255 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 OR10J1P30954 320 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 RAB31Q13636 194 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 AWAT1Q58HT5 328 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 SLC51BQ86UW2 128 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 C11orf44Q8N8P7 122 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 MGST2Q99735 147 aa13.19□□□□□ -0.3
LINC00887-203ENST00000429578 SCGB2A1O75556 95 aa13.18□□□□□ -0.3
LINC00887-203ENST00000429578 LGALS1P09382 135 aaKnown RBP13.18□□□□□ -0.3
LINC00887-203ENST00000429578 EIF5AP63241 154 aaKnown RBP13.18□□□□□ -0.3
LINC00887-203ENST00000429578 KHDC1LQ5JSQ8 128 aa13.18□□□□□ -0.3
LINC00887-203ENST00000429578 HSD17B11Q8NBQ5 300 aa13.18□□□□□ -0.3
LINC00887-203ENST00000429578 STOML3Q8TAV4 291 aa13.18□□□□□ -0.3
LINC00887-203ENST00000429578 OR5B12Q96R08 314 aa13.18□□□□□ -0.3
LINC00887-203ENST00000429578 TRGV9Q99603 122 aa13.18□□□□□ -0.3
LINC00887-203ENST00000429578 CITED2Q99967 270 aaPredicted RBP13.18□□□□□ -0.3
LINC00887-203ENST00000429578 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
LINC00887-203ENST00000429578 ARV1Q9H2C2 271 aa13.18□□□□□ -0.3
LINC00887-203ENST00000429578 AGPAT2O15120 278 aa13.17□□□□□ -0.3
LINC00887-203ENST00000429578 NUPL2O15504 423 aaKnown RBP13.17□□□□□ -0.3
LINC00887-203ENST00000429578 TGOLN2O43493 480 aa13.17□□□□□ -0.3
LINC00887-203ENST00000429578 IGKV1-17P01599 117 aa13.17□□□□□ -0.3
LINC00887-203ENST00000429578 TPT1P13693 172 aaKnown RBP13.17□□□□□ -0.3
LINC00887-203ENST00000429578 ADMP35318 185 aa13.17□□□□□ -0.3
LINC00887-203ENST00000429578 CAMLGP49069 296 aa13.17□□□□□ -0.3
LINC00887-203ENST00000429578 KRTAP10-3P60369 221 aa13.17□□□□□ -0.3
LINC00887-203ENST00000429578 SPSB3Q6PJ21 355 aa13.17□□□□□ -0.3
LINC00887-203ENST00000429578 GINS3Q9BRX5 216 aa13.17□□□□□ -0.3
LINC00887-203ENST00000429578 PEF1Q9UBV8 284 aaKnown RBP13.17□□□□□ -0.3
LINC00887-203ENST00000429578 TSSC4Q9Y5U2 329 aaPredicted RBP13.17□□□□□ -0.3
LINC00887-203ENST00000429578 ANKRD34BA5PLL1 514 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 RUNX1Q01196 453 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 ZNF90Q03938 601 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 TIGITQ495A1 244 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 BAP18Q8IXM2 172 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 C4orf3Q8WVX3 66 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 CHRDL1Q9BU40 450 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 GGTLC1Q9BX51 225 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 PPP5D1E7EU14 171 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 I3L521 148 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 ATP6V0CP27449 155 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 ARL3P36405 182 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 C3orf56Q8N813 242 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 ZNF709Q8N972 641 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
LINC00887-203ENST00000429578 RSG1Q9BU20 258 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 TENM1Q9UKZ4 2725 aa13.16□□□□□ -0.3
LINC00887-203ENST00000429578 C17orf112F2Z3M2 114 aa13.15□□□□□ -0.3
LINC00887-203ENST00000429578 YPEL3P61236 119 aaPredicted RBP13.15□□□□□ -0.3
LINC00887-203ENST00000429578 SELENOTP62341 195 aa13.15□□□□□ -0.3
LINC00887-203ENST00000429578 HIST2H2BDQ6DRA6 164 aa13.15□□□□□ -0.3
LINC00887-203ENST00000429578 CYP2G1PQ6ZSU1 146 aa13.15□□□□□ -0.3
LINC00887-203ENST00000429578 C18orf65Q6ZTR6 163 aa13.15□□□□□ -0.3
LINC00887-203ENST00000429578 KLHL30-AS1Q8NEE0 82 aa13.15□□□□□ -0.3
LINC00887-203ENST00000429578 ST8SIA2Q92186 375 aa13.15□□□□□ -0.3
LINC00887-203ENST00000429578 SLC45A2Q9UMX9 530 aa13.15□□□□□ -0.3
LINC00887-203ENST00000429578 TIMM9Q9Y5J7 89 aa13.15□□□□□ -0.3
LINC00887-203ENST00000429578 FABP1P07148 127 aa13.14□□□□□ -0.31
LINC00887-203ENST00000429578 RPL29P47914 159 aaKnown RBP13.14□□□□□ -0.31
LINC00887-203ENST00000429578 PSMG3Q9BT73 122 aaPredicted RBP13.14□□□□□ -0.31
LINC00887-203ENST00000429578 BMPR1BO00238 502 aa13.13□□□□□ -0.31
LINC00887-203ENST00000429578 TOMM40O96008 361 aa13.13□□□□□ -0.31
LINC00887-203ENST00000429578 PSG1P11464 419 aa13.13□□□□□ -0.31
LINC00887-203ENST00000429578 ZNF616Q08AN1 781 aa13.13□□□□□ -0.31
LINC00887-203ENST00000429578 TMEM182Q6ZP80 229 aaPredicted RBP13.13□□□□□ -0.31
LINC00887-203ENST00000429578 SH3BGRL3Q9H299 93 aa13.13□□□□□ -0.31
LINC00887-203ENST00000429578 KCNIP2Q9NS61 270 aa13.13□□□□□ -0.31
LINC00887-203ENST00000429578 NUDT19A8MXV4 375 aa13.13□□□□□ -0.31
LINC00887-203ENST00000429578 GGCTO75223 188 aaKnown RBP13.13□□□□□ -0.31
LINC00887-203ENST00000429578 HSPB1P04792 205 aaKnown RBP13.13□□□□□ -0.31
LINC00887-203ENST00000429578 RD3LP0DJH9 198 aa13.13□□□□□ -0.31
LINC00887-203ENST00000429578 SPP1P10451 314 aa13.13□□□□□ -0.31
LINC00887-203ENST00000429578 GATA2P23769 480 aaPredicted RBP13.13□□□□□ -0.31
LINC00887-203ENST00000429578 PRR20EP86478 221 aa13.13□□□□□ -0.31
LINC00887-203ENST00000429578 PRR20CP86479 221 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms