RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 TMEM70Q9BUB7 260 aa11.26□□□□□ -0.61
SGMS1-203ENST00000429490 MAP1LC3CQ9BXW4 147 aa11.26□□□□□ -0.61
SGMS1-203ENST00000429490 C9JCJ5 164 aa11.26□□□□□ -0.61
SGMS1-203ENST00000429490 NBEAP1P0C6P0 100 aa11.26□□□□□ -0.61
SGMS1-203ENST00000429490 PRRX1P54821 245 aa11.26□□□□□ -0.61
SGMS1-203ENST00000429490 VSTM2AQ8TAG5 236 aa11.26□□□□□ -0.61
SGMS1-203ENST00000429490 ZNF714Q96N38 554 aa11.26□□□□□ -0.61
SGMS1-203ENST00000429490 GP6Q9HCN6 339 aa11.26□□□□□ -0.61
SGMS1-203ENST00000429490 COLQQ9Y215 455 aaPredicted RBP11.26□□□□□ -0.61
SGMS1-203ENST00000429490 C15orf65H3BRN8 121 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 CORTO00230 105 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 SS18L1O75177 396 aaPredicted RBP11.25□□□□□ -0.61
SGMS1-203ENST00000429490 CD69Q07108 199 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 MDS2Q8NDY4 140 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 SLC25A33Q9BSK2 321 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 SFXN3Q9BWM7 321 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 TECTAO75443 2155 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 TRAV8-1A0A0A6YYK1 113 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 hDV102S1A0JD36 115 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 CA7P43166 264 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 OR52E5Q8NH55 327 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 ZFP30Q9Y2G7 519 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 NCKAP5O14513 1909 aa11.25□□□□□ -0.61
SGMS1-203ENST00000429490 PRCDQ00LT1 54 aa11.24□□□□□ -0.61
SGMS1-203ENST00000429490 SRSF12Q8WXF0 261 aaKnown RBP11.24□□□□□ -0.61
SGMS1-203ENST00000429490 TRAV9-1A0A075B6T8 112 aa11.24□□□□□ -0.61
SGMS1-203ENST00000429490 K7EQM0 130 aa11.24□□□□□ -0.61
SGMS1-203ENST00000429490 NUP35Q8NFH5 326 aa11.24□□□□□ -0.61
SGMS1-203ENST00000429490 PRR7Q8TB68 274 aa11.24□□□□□ -0.61
SGMS1-203ENST00000429490 LAMA5O15230 3695 aa11.24□□□□□ -0.61
SGMS1-203ENST00000429490 DLX1P56177 255 aa11.24□□□□□ -0.61
SGMS1-203ENST00000429490 NIT1Q86X76 327 aa11.24□□□□□ -0.61
SGMS1-203ENST00000429490 IGHV3-35A0A0C4DH35 117 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 A0A1W2PRE2 83 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 SLC25A34Q6PIV7 304 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 TMEM108Q6UXF1 575 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 TEX43Q6ZNM6 134 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 TLN1Q9Y490 2541 aaKnown RBP11.23□□□□□ -0.61
SGMS1-203ENST00000429490 PPOXP50336 477 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 HBBP68871 147 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 COTL1Q14019 142 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 FAM162BQ5T6X4 162 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 RAB37Q96AX2 223 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.23□□□□□ -0.61
SGMS1-203ENST00000429490 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
SGMS1-203ENST00000429490 SRRM4A7MD48 611 aaKnown RBP11.23□□□□□ -0.61
SGMS1-203ENST00000429490 IGLC2P0DOY2 106 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 IGLC3P0DOY3 106 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 FCER1GP30273 86 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 GLRXP35754 106 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 OR10J3Q5JRS4 329 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 MORN5Q5VZ52 161 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 OR4C13Q8NGP0 309 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 C18orf32Q8TCD1 76 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 FOXA2Q9Y261 457 aaPredicted RBP11.23□□□□□ -0.61
SGMS1-203ENST00000429490 INSIG2Q9Y5U4 225 aa11.23□□□□□ -0.61
SGMS1-203ENST00000429490 ZNF891A8MT65 544 aaPredicted RBP11.22□□□□□ -0.61
SGMS1-203ENST00000429490 TSPOP30536 169 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 RPL27AP46776 148 aaKnown RBP11.22□□□□□ -0.61
SGMS1-203ENST00000429490 Q0VG73 95 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 VWC2Q2TAL6 325 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 MPV17L2Q567V2 206 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 WFDC3Q8IUB2 231 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 RPEQ96AT9 228 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 TRAV9-2A0A087WT02 112 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 IGKV3-15P01624 115 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
SGMS1-203ENST00000429490 FAM87AP0C7U9 286 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 RPRMLQ8N4K4 120 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 GRAMD2BQ96HH9 432 aa11.22□□□□□ -0.61
SGMS1-203ENST00000429490 NAA38Q9BRA0 125 aaKnown RBP11.22□□□□□ -0.61
SGMS1-203ENST00000429490 PPIAL4EA0A075B759 164 aa11.21□□□□□ -0.61
SGMS1-203ENST00000429490 IGHV3OR16-8A0A075B7F1 116 aa11.21□□□□□ -0.61
SGMS1-203ENST00000429490 FAM181BA6NEQ2 426 aa11.21□□□□□ -0.61
SGMS1-203ENST00000429490 PPIAL4DF5H284 164 aa11.21□□□□□ -0.61
SGMS1-203ENST00000429490 PPIAL4FP0DN26 164 aa11.21□□□□□ -0.61
SGMS1-203ENST00000429490 SELENOTP62341 195 aa11.21□□□□□ -0.61
SGMS1-203ENST00000429490 AARDQ4LEZ3 155 aa11.21□□□□□ -0.61
SGMS1-203ENST00000429490 RASL11BQ9BPW5 248 aa11.21□□□□□ -0.61
SGMS1-203ENST00000429490 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.61
SGMS1-203ENST00000429490 ANKHD1Q8IWZ3 2542 aaKnown RBP11.21□□□□□ -0.61
SGMS1-203ENST00000429490 PRRG2O14669 202 aa11.21□□□□□ -0.61
SGMS1-203ENST00000429490 ZNF71Q9NQZ8 489 aaPredicted RBP11.21□□□□□ -0.61
SGMS1-203ENST00000429490 FXYD7P58549 80 aa11.21□□□□□ -0.62
SGMS1-203ENST00000429490 SSBP2P81877 361 aaPredicted RBP11.21□□□□□ -0.62
SGMS1-203ENST00000429490 TMEM116Q8NCL8 245 aa11.21□□□□□ -0.62
SGMS1-203ENST00000429490 OR4F17Q8NGA8 305 aa11.21□□□□□ -0.62
SGMS1-203ENST00000429490 MRPL32Q9BYC8 188 aaKnown RBP11.21□□□□□ -0.62
SGMS1-203ENST00000429490 RNF114Q9Y508 228 aa11.21□□□□□ -0.62
SGMS1-203ENST00000429490 TRGV8A0A0C4DH27 118 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 KLK10O43240 276 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 BPIFA4PQ86YQ2 179 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 STXBP6Q8NFX7 210 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 CEP295Q9C0D2 2601 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 IGKV1OR2-108A0A075B7D4 117 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 P0C879 139 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 NMUP48645 174 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 LOXL3P58215 753 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms