RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 TCF24Q7RTU0 167 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 WFDC3Q8IUB2 231 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 ST8SIA2Q92186 375 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 CLUHP3Q96NS8 147 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 OVOL2Q9BRP0 275 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 RBKSQ9H477 322 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 SHPKQ9UHJ6 478 aa7.03□□□□□ -1.28
TRIM39-208ENST00000428555 RPS10-NUDT3A0A1W2PQS6 291 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 IFNA10P01566 189 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 RPL35AP18077 110 aaKnown RBP7.02□□□□□ -1.29
TRIM39-208ENST00000428555 NPPCP23582 126 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 RND2P52198 227 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 ZNF124Q15973 351 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 BAK1Q16611 211 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 SPANXN2Q5MJ10 180 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 SLC24A4Q8NFF2 622 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 RNASEH2CQ8TDP1 164 aaKnown RBP7.02□□□□□ -1.29
TRIM39-208ENST00000428555 SLC25A21Q9BQT8 299 aaPredicted RBP7.02□□□□□ -1.29
TRIM39-208ENST00000428555 SRRQ9GZT4 340 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 VSIRQ9H7M9 311 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 HSPB7Q9UBY9 170 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 CACFD1Q9UGQ2 172 aa7.02□□□□□ -1.29
TRIM39-208ENST00000428555 STARD9Q9P2P6 4700 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 TRAV30A0A087WSZ9 112 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 DNASE2O00115 360 aaPredicted RBP7.01□□□□□ -1.29
TRIM39-208ENST00000428555 IGLC1P0CG04 106 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 SLC25A4P12235 298 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 NPY1RP25929 384 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 CMC4P56277 68 aaPredicted RBP7.01□□□□□ -1.29
TRIM39-208ENST00000428555 RPL11P62913 178 aaKnown RBP7.01□□□□□ -1.29
TRIM39-208ENST00000428555 PAFAH1B2P68402 229 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 SRPXP78539 464 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 RBMS2Q15434 407 aaKnown RBP7.01□□□□□ -1.29
TRIM39-208ENST00000428555 NOXA1Q86UR1 476 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 OR1S1Q8NH92 325 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 DTD1Q8TEA8 209 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 Q8WTZ3 238 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 NPIPB3Q92617 1050 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 ACY3Q96HD9 319 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 MS4A6AQ9H2W1 248 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 U3KQ87 197 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 CSMD3Q7Z407 3707 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 RYR2Q92736 4967 aa7.01□□□□□ -1.29
TRIM39-208ENST00000428555 PLECQ15149 4684 aaKnown RBP7.01□□□□□ -1.29
TRIM39-208ENST00000428555 A0A1W2PS18 150 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 TSC22D2O75157 780 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 PITX3O75364 302 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 SFT2D2O95562 160 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 IFNA4P05014 189 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 CD5P06127 495 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 CRYBB3P26998 211 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 OR10J1P30954 320 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 BMI1P35226 326 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 INPP1P49441 399 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 APOC4P55056 127 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 PPP1R1AQ13522 171 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 ODF1Q14990 250 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 ETFRF1Q6IPR1 90 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 STPG3Q8N7X2 389 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 OR1S2Q8NGQ3 325 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 DEDD2Q8WXF8 326 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 METTL26Q96S19 204 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 SDHCQ99643 169 aaPredicted RBP7□□□□□ -1.29
TRIM39-208ENST00000428555 FLVCR2Q9UPI3 526 aa7□□□□□ -1.29
TRIM39-208ENST00000428555 DUXBA0A1W2PPF3 345 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 UBE2CO00762 179 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 SPRY2O43597 315 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 SCGB2A1O75556 95 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 HOXB5P09067 269 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 RD3LP0DJH9 198 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 YPEL3P61236 119 aaPredicted RBP6.99□□□□□ -1.29
TRIM39-208ENST00000428555 DEFB135Q30KP9 77 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 LCE2DQ5TA82 110 aaPredicted RBP6.99□□□□□ -1.29
TRIM39-208ENST00000428555 TRIQKQ629K1 86 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 Q6ZWC4 215 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 CENPSQ8N2Z9 138 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 FAM24BQ8N5W8 94 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 LRTM2Q8N967 370 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 TMEM231Q9H6L2 316 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 MAP6D1Q9H9H5 199 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 RABAC1Q9UI14 185 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 U3KQE9 123 aa6.99□□□□□ -1.29
TRIM39-208ENST00000428555 PIGBOS1A0A0B4J2F0 54 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 KIR2DL5BA0A0G2JN68 375 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 KIR2DL5BA0A0G2JPC4 375 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 C9orf170A2RU37 121 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 NAP1L6A6NFF2 107 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 IAPPP10997 89 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 PSG1P11464 419 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 SLC25A6P12236 298 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 GPX4P36969 197 aaPredicted RBP6.98□□□□□ -1.29
TRIM39-208ENST00000428555 P2RY1P47900 373 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 ATP5IP56385 69 aaPredicted RBP6.98□□□□□ -1.29
TRIM39-208ENST00000428555 DEFB131AP59861 70 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 CTAG1AP78358 180 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 GAMTQ14353 236 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 GGNBP1Q5YKI7 109 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 LEMD1Q68G75 181 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms