RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 OPRK1P41145 380 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 HOXA1P49639 335 aaPredicted RBP11.93□□□□□ -0.5
VARS-216ENST00000428445 SPCS3P61009 180 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 SSBP1Q04837 148 aaKnown RBP11.93□□□□□ -0.5
VARS-216ENST00000428445 TRIM16LQ309B1 348 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 C12orf74Q32Q52 190 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 BSXQ3C1V8 233 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 Q6ZRM9 215 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 RAB40CQ96S21 281 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.93□□□□□ -0.5
VARS-216ENST00000428445 A0A1B0GVY2 172 aa11.92□□□□□ -0.5
VARS-216ENST00000428445 CDS2O95674 445 aa11.92□□□□□ -0.5
VARS-216ENST00000428445 HTR2BP41595 481 aa11.92□□□□□ -0.5
VARS-216ENST00000428445 TAS2R19P59542 299 aa11.92□□□□□ -0.5
VARS-216ENST00000428445 DHRS2Q13268 280 aa11.92□□□□□ -0.5
VARS-216ENST00000428445 GSG1LQ6UXU4 331 aa11.92□□□□□ -0.5
VARS-216ENST00000428445 OR52I2Q8NH67 350 aa11.92□□□□□ -0.5
VARS-216ENST00000428445 ABHD1Q96SE0 405 aa11.92□□□□□ -0.5
VARS-216ENST00000428445 TBC1D24Q9ULP9 559 aa11.92□□□□□ -0.5
VARS-216ENST00000428445 SLC25A4P12235 298 aa11.91□□□□□ -0.5
VARS-216ENST00000428445 MRPS10P82664 201 aaKnown RBP11.91□□□□□ -0.5
VARS-216ENST00000428445 DHODHQ02127 395 aa11.91□□□□□ -0.5
VARS-216ENST00000428445 SURF2Q15527 256 aaPredicted RBP11.91□□□□□ -0.5
VARS-216ENST00000428445 PSMG4Q5JS54 123 aa11.91□□□□□ -0.5
VARS-216ENST00000428445 NOXA1Q86UR1 476 aa11.91□□□□□ -0.5
VARS-216ENST00000428445 OR4D10Q8NGI6 311 aa11.91□□□□□ -0.5
VARS-216ENST00000428445 Q8WTZ3 238 aa11.91□□□□□ -0.5
VARS-216ENST00000428445 TMEM222Q9H0R3 208 aa11.91□□□□□ -0.5
VARS-216ENST00000428445 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
VARS-216ENST00000428445 DNAH11Q96DT5 4516 aa11.91□□□□□ -0.5
VARS-216ENST00000428445 DEFB131BA0A096LNP1 70 aa11.9□□□□□ -0.5
VARS-216ENST00000428445 TEX13DA0A0J9YY54 714 aaPredicted RBP11.9□□□□□ -0.5
VARS-216ENST00000428445 HELTA6NFD8 242 aa11.9□□□□□ -0.5
VARS-216ENST00000428445 GABARAPH6UMI1 98 aa11.9□□□□□ -0.5
VARS-216ENST00000428445 GABARAPO95166 117 aa11.9□□□□□ -0.5
VARS-216ENST00000428445 DEFB1P60022 68 aa11.9□□□□□ -0.5
VARS-216ENST00000428445 YPEL3P61236 119 aaPredicted RBP11.9□□□□□ -0.5
VARS-216ENST00000428445 C2orf83Q53S99 150 aa11.9□□□□□ -0.5
VARS-216ENST00000428445 CENPSQ8N2Z9 138 aa11.9□□□□□ -0.5
VARS-216ENST00000428445 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.5
VARS-216ENST00000428445 XCL2Q9UBD3 114 aa11.9□□□□□ -0.5
VARS-216ENST00000428445 EXTL2Q9UBQ6 330 aa11.9□□□□□ -0.5
VARS-216ENST00000428445 U3KQE9 123 aa11.9□□□□□ -0.5
VARS-216ENST00000428445 RAB3DO95716 219 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 MEF2DQ14814 521 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 CTF1Q16619 201 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 ETFRF1Q6IPR1 90 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 STEAP1BQ6NZ63 245 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 C16orf54Q6UWD8 224 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 OR1S2Q8NGQ3 325 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 OR13C8Q8NGS7 320 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 RNASE11Q8TAA1 199 aaKnown RBP11.89□□□□□ -0.51
VARS-216ENST00000428445 GLYATL2Q8WU03 294 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 GLMPQ8WWB7 406 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 RBPMSQ93062 196 aaKnown RBP11.89□□□□□ -0.51
VARS-216ENST00000428445 RNF126Q9BV68 326 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 RABL2AQ9UBK7 228 aaPredicted RBP11.89□□□□□ -0.51
VARS-216ENST00000428445 RABL2BQ9UNT1 228 aa11.89□□□□□ -0.51
VARS-216ENST00000428445 RTL8CO15255 209 aa11.88□□□□□ -0.51
VARS-216ENST00000428445 NXPH3O95157 252 aa11.88□□□□□ -0.51
VARS-216ENST00000428445 FXYD7P58549 80 aa11.88□□□□□ -0.51
VARS-216ENST00000428445 USF2Q15853 346 aaPredicted RBP11.88□□□□□ -0.51
VARS-216ENST00000428445 SCGB2B2Q4G0G5 96 aa11.88□□□□□ -0.51
VARS-216ENST00000428445 MARCH1Q8TCQ1 289 aa11.88□□□□□ -0.51
VARS-216ENST00000428445 HEYLQ9NQ87 328 aaPredicted RBP11.88□□□□□ -0.51
VARS-216ENST00000428445 PLA2G2EQ9NZK7 142 aa11.88□□□□□ -0.51
VARS-216ENST00000428445 C14orf166Q9Y224 244 aaKnown RBP11.88□□□□□ -0.51
VARS-216ENST00000428445 MUC4Q99102 2169 aa11.88□□□□□ -0.51
VARS-216ENST00000428445 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
VARS-216ENST00000428445 HNRNPCP07910 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
VARS-216ENST00000428445 IGLC1P0CG04 106 aa11.87□□□□□ -0.51
VARS-216ENST00000428445 RND2P52198 227 aa11.87□□□□□ -0.51
VARS-216ENST00000428445 NUTF2P61970 127 aaKnown RBP11.87□□□□□ -0.51
VARS-216ENST00000428445 PRSS54Q6PEW0 395 aa11.87□□□□□ -0.51
VARS-216ENST00000428445 LINC00336Q6ZUF6 198 aa11.87□□□□□ -0.51
VARS-216ENST00000428445 POM121L12Q8N7R1 296 aa11.87□□□□□ -0.51
VARS-216ENST00000428445 LHFPL5Q8TAF8 219 aa11.87□□□□□ -0.51
VARS-216ENST00000428445 TMEM170AQ8WVE7 144 aa11.87□□□□□ -0.51
VARS-216ENST00000428445 RTBDNQ9BSG5 229 aaPredicted RBP11.87□□□□□ -0.51
VARS-216ENST00000428445 DISC1C4P0D8 188 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 FAM90A26D6RGX4 464 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 IGKV3-20P01619 116 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 EMP1P54849 157 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 ATP5IP56385 69 aaPredicted RBP11.86□□□□□ -0.51
VARS-216ENST00000428445 GDF5OSQ5U4N7 250 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 IL22RA2Q969J5 263 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 C1QTNF4Q9BXJ3 329 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 NAA60Q9H7X0 242 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 GPR132Q9UNW8 380 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 KCNIP3Q9Y2W7 256 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 TMEM56-RWDD3S4R434 201 aa11.86□□□□□ -0.51
VARS-216ENST00000428445 IGLV2-18A0A075B6J9 118 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 H3BMM0 161 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 GSTZ1O43708 216 aaPredicted RBP11.85□□□□□ -0.51
VARS-216ENST00000428445 OR5AC1P0C628 307 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 OR10J1P30954 320 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 SNRPD3P62318 126 aaKnown RBP11.85□□□□□ -0.51
VARS-216ENST00000428445 GPR107Q5VW38 600 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 FAAP20Q6NZ36 180 aa11.85□□□□□ -0.51
VARS-216ENST00000428445 SELENOHQ8IZQ5 122 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms