RNA–Protein interactions for RNA: ENST00000428376.6

SFTPA1-203, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,141 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-203ENST00000428376 SLC35E3Q7Z769 313 aa10.48□□□□□ -0.73
SFTPA1-203ENST00000428376 SCRT1Q9BWW7 348 aa10.48□□□□□ -0.73
SFTPA1-203ENST00000428376 MAP1LC3BQ9GZQ8 125 aa10.48□□□□□ -0.73
SFTPA1-203ENST00000428376 TRAV41A0A0B4J266 112 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 A0A1B0GV50 99 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 A0A1W2PPV4 95 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 G3V318 75 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 TSPAN4O14817 238 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 CLN5O75503 358 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 CD5P06127 495 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 DEFA5Q01523 94 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 C9orf152Q5JTZ5 239 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 PBDC1Q9BVG4 233 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 SLC25A22Q9H936 323 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 VPREB3Q9UKI3 123 aa10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 CARHSP1Q9Y2V2 147 aaKnown RBP10.47□□□□□ -0.73
SFTPA1-203ENST00000428376 AKAP9Q99996 3911 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 TRBV9A0A0B4J1U6 114 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 DNASE2O00115 360 aaPredicted RBP10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 NDUFB8O95169 186 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 IGLC1P0CG04 106 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 GATA2P23769 480 aaPredicted RBP10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 NPBWR1P48145 328 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 MFAP4P55083 255 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 RHOBP62745 196 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 ZNF90Q03938 601 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 GUK1Q16774 197 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 VN1R17PQ8TDU5 208 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 TMEM231Q9H6L2 316 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 FBXL7Q9UJT9 491 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 ZNF580Q9UK33 172 aa10.46□□□□□ -0.73
SFTPA1-203ENST00000428376 OR2J3O76001 311 aa10.46□□□□□ -0.74
SFTPA1-203ENST00000428376 PEA15Q15121 130 aa10.46□□□□□ -0.74
SFTPA1-203ENST00000428376 GUCA2BQ16661 112 aa10.46□□□□□ -0.74
SFTPA1-203ENST00000428376 SMDT1Q9H4I9 107 aa10.46□□□□□ -0.74
SFTPA1-203ENST00000428376 YAE1D1Q9NRH1 226 aa10.46□□□□□ -0.74
SFTPA1-203ENST00000428376 TRAV30A0A087WSZ9 112 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 RBFOX3A6NFN3 312 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 AP4M1O00189 453 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 BRI3O95415 125 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 FCGR2BP31994 310 aaPredicted RBP10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 SRP14P37108 136 aaKnown RBP10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 FGF8P55075 233 aaPredicted RBP10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 GATAD1Q8WUU5 269 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 TXN2Q99757 166 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 NKX6-2Q9C056 277 aaPredicted RBP10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 DNAJC4Q9NNZ3 241 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 TREM1Q9NP99 234 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 C21orf62Q9NYP8 219 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 ZNF469Q96JG9 3925 aaPredicted RBP10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 PSMB11A5LHX3 300 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 HOXA3O43365 443 aaPredicted RBP10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 FABP1P07148 127 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 NECAP1Q8NC96 275 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 OR1L4Q8NGR5 311 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 RNF2Q99496 336 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 SEC11CQ9BY50 192 aa10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 EIF5A2Q9GZV4 153 aaKnown RBP10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 SEPSECSQ9HD40 501 aaKnown RBP10.45□□□□□ -0.74
SFTPA1-203ENST00000428376 NOTCH2Q04721 2471 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 FAM74A7A6NL05 159 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 C9JQL5 133 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 HMGB3O15347 200 aaKnown RBP10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 NUPL2O15504 423 aaKnown RBP10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 IGKV1-17P01599 117 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 OR5G3P0C626 314 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 STAG3L2P0CL84 134 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 RHOGP84095 191 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 FAM74A3Q4VXF1 159 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 Q6ZS46 218 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 IL17RELQ6ZVW7 336 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 SVBPQ8N300 66 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 TMEM86BQ8N661 226 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 SIGLECL1Q8N7X8 197 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 PFDN5Q99471 154 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 GSX1Q9H4S2 264 aaPredicted RBP10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 ZNF355PQ9NSJ1 428 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 TMEM160Q9NX00 188 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 FUT9Q9Y231 359 aa10.44□□□□□ -0.74
SFTPA1-203ENST00000428376 ELOA3CA0A087WX78 387 aaPredicted RBP10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 F8W036 122 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 H3BUA1 57 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 EIF3GO75821 320 aaKnown RBP eCLIP10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 HNF1AP20823 631 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 PPIFP30405 207 aaKnown RBP10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 PLP1P60201 277 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 TIGITQ495A1 244 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 FAM78BQ5VT40 261 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 TMEM37Q8WXS4 190 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 MXRA5Q9NR99 2828 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 TLN2Q9Y4G6 2542 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 MYO9AB2RTY4 2548 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 F8W735 103 aaPredicted RBP10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 GNG7O60262 68 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 YPEL3P61236 119 aaPredicted RBP10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 C15orf32Q32M92 178 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 ZNF506Q5JVG8 444 aa10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 RBMS3Q6XE24 437 aaKnown RBP10.43□□□□□ -0.74
SFTPA1-203ENST00000428376 MRPL32Q9BYC8 188 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms