RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 OR1C1Q15619 314 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 PRRG4Q9BZD6 226 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 A0A087X0K7 114 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 NGFP01138 241 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 CD46P15529 392 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 DUSP3P51452 185 aaPredicted RBP4.19□□□□□ -1.74
RIF1-203ENST00000428287 CCL11P51671 97 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 FAM90A1Q86YD7 464 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 TAAR6Q96RI8 345 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 TM2D2Q9BX73 214 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 PATE4P0C8F1 98 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 GPR183P32249 361 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 SIGLEC8Q9NYZ4 499 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 A0A096LNJ9 63 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 HSPB8Q9UJY1 196 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 RNF24Q9Y225 148 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 FOXA2Q9Y261 457 aaPredicted RBP4.19□□□□□ -1.74
RIF1-203ENST00000428287 F2RL2O00254 374 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 SRSF1Q07955 248 aaKnown RBP eCLIP4.18□□□□□ -1.741e-6■■■■□ 20.6
RIF1-203ENST00000428287 AAED1Q7RTV5 226 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 THAP3Q8WTV1 239 aaPredicted RBP4.18□□□□□ -1.74
RIF1-203ENST00000428287 GPR82Q96P67 336 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 CR1P17927 2039 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 C8orf88P0DMB2 117 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 A0A1W2PPM0 123 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 C15orf65H3BRN8 121 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 M0R2Z0 102 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 G6PCP35575 357 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 LINC00574Q9H8X3 128 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 PGPEP1Q9NXJ5 209 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 ATRQ13535 2644 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 C15orf61A6NNL5 157 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 K7EP34 96 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 HOXB4P17483 251 aaPredicted RBP4.18□□□□□ -1.74
RIF1-203ENST00000428287 HSPE1P61604 102 aaKnown RBP4.18□□□□□ -1.74
RIF1-203ENST00000428287 PAX8Q06710 450 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 PCOLCEQ15113 449 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 ABHD12Q8N2K0 398 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 SPEM1Q8N4L4 309 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 PHLDA1Q8WV24 401 aaPredicted RBP4.18□□□□□ -1.74
RIF1-203ENST00000428287 RNF208Q9H0X6 261 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 OCIAD1Q9NX40 245 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 IGHV3-20A0A0C4DH32 117 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 A0A0G2JLM5 398 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 HSPB6O14558 160 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 NHLH1Q02575 133 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 LGALS9BQ3B8N2 356 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 LGALS9CQ6DKI2 356 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 WDR86Q86TI4 376 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 NABP2Q9BQ15 211 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 SPATA25Q9BR10 227 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 DUSP23Q9BVJ7 150 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 DEFB126Q9BYW3 111 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 GFRA4Q9GZZ7 299 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 CLEC5AQ9NY25 188 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 hDV102S1A0JD36 115 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 OOEPA6NGQ2 149 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 KLF7O75840 302 aaPredicted RBP4.18□□□□□ -1.74
RIF1-203ENST00000428287 OR2H2O95918 312 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 SRYQ05066 204 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 ZADH2Q8N4Q0 377 aa4.18□□□□□ -1.74
RIF1-203ENST00000428287 SNRNP40Q96DI7 357 aaKnown RBP4.18□□□□□ -1.74
RIF1-203ENST00000428287 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.17□□□□□ -1.74
RIF1-203ENST00000428287 CA1P00915 261 aaPredicted RBP4.17□□□□□ -1.74
RIF1-203ENST00000428287 RBPMS2Q6ZRY4 209 aaKnown RBP4.17□□□□□ -1.74
RIF1-203ENST00000428287 SRXN1Q9BYN0 137 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 A0A0G2JMM0 328 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 A0A1W2PPB8 328 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 ZNF785A8K8V0 405 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 KIR3DP1A8MWS1 328 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 CCL3P10147 92 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 HBBP68871 147 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 MRPL21Q7Z2W9 205 aaKnown RBP4.17□□□□□ -1.74
RIF1-203ENST00000428287 ATP6V0BQ99437 205 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 MRPL32Q9BYC8 188 aaKnown RBP4.17□□□□□ -1.74
RIF1-203ENST00000428287 DUX1O43812 170 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 HBZP02008 142 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 OTX2P32243 289 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 LOXL3P58215 753 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 COQ2Q96H96 371 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 HHLA3Q9XRX5 114 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 AZU1P20160 251 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 JMJD8Q96S16 334 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 TP73-AS1Q9UF72 201 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 TMEM30CPA0ZSE6 113 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 M0R296 226 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 STXBP6Q8NFX7 210 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 LINC00479Q96M42 142 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 SIGMAR1Q99720 223 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 TRAPPC2LQ9UL33 140 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 A6NDN8 102 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 C2CD4DB7Z1M9 353 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 TAS2R45P59539 299 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 FOXE3Q13461 319 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 LINC01559Q495D7 138 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 COX8CQ7Z4L0 72 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 SLC25A45Q8N413 288 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 IGSF10Q6WRI0 2623 aa4.17□□□□□ -1.74
RIF1-203ENST00000428287 LOC102724200A0A096LPH7 203 aaPredicted RBP4.16□□□□□ -1.74
RIF1-203ENST00000428287 E9PLD3 99 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms