RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 TRAV3A0A0B4J244 114 aa8.04□□□□□ -1.12
SNX13-203ENST00000428135 PAX8Q06710 450 aa8.04□□□□□ -1.12
SNX13-203ENST00000428135 C15orf32Q32M92 178 aa8.04□□□□□ -1.12
SNX13-203ENST00000428135 TRAV8-6A0A0B4J262 113 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 C15orf61A6NNL5 157 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 SAPCD1Q5SSQ6 148 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 C3orf56Q8N813 242 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 KLHL30-AS1Q8NEE0 82 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 FANCMQ8IYD8 2048 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 B4DSR2 109 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 TDGF1P13385 188 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 DPH3P1Q9H4G8 78 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 JKAMPQ9P055 326 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 ERVH48-1M5A8F1 160 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 DUTP33316 252 aaKnown RBP8.03□□□□□ -1.12
SNX13-203ENST00000428135 LYRM7Q5U5X0 104 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 MED13LQ71F56 2210 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 TMEM8BA6NDV4 472 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 PGPEP1LA6NFU8 196 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 HLA-DQA1P01909 254 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 EVI2AP22794 236 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 Q5PR19 223 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 UBE2E2Q96LR5 201 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 FOXC2Q99958 501 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 SDF2L1Q9HCN8 221 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 GAS1P54826 345 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 ZNF324BQ6AW86 544 aaPredicted RBP8.03□□□□□ -1.12
SNX13-203ENST00000428135 GFI1Q99684 422 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 SSBP4Q9BWG4 385 aaPredicted RBP8.03□□□□□ -1.12
SNX13-203ENST00000428135 SIP14410 1827 aa8.03□□□□□ -1.12
SNX13-203ENST00000428135 TRGV4A0A0C4DH28 118 aa8.02□□□□□ -1.12
SNX13-203ENST00000428135 IGHV1-3A0A0C4DH29 117 aa8.02□□□□□ -1.12
SNX13-203ENST00000428135 IGKV2-40A0A087WW87 121 aaPredicted RBP8.02□□□□□ -1.13
SNX13-203ENST00000428135 IGKV2D-40P01614 121 aaPredicted RBP8.02□□□□□ -1.13
SNX13-203ENST00000428135 B3GALT5-AS1P59052 145 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 ST6GALNAC6Q969X2 333 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 WISP1O95388 367 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 SOD3P08294 240 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 ZNF688P0C7X2 276 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 DMRTA1Q5VZB9 504 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 HBBP68871 147 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 RNASEH2CQ8TDP1 164 aaKnown RBP8.02□□□□□ -1.13
SNX13-203ENST00000428135 PRELID3AQ96N28 172 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 C19orf24Q9BVV8 132 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 A6NDN8 102 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 NDUFA3O95167 84 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 PIP4P1Q86T03 277 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 OR1P1Q8NH06 330 aa8.02□□□□□ -1.13
SNX13-203ENST00000428135 KIF26AQ9ULI4 1882 aaPredicted RBP8.01□□□□□ -1.13
SNX13-203ENST00000428135 SRRM5B3KS81 715 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 OR10AG1Q8NH19 301 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 TPTE2P1Q5T6R2 138 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 UBE2DNLQ8IWF7 75 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 KIAA1671Q9BY89 1806 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 APOHP02749 345 aaPredicted RBP8.01□□□□□ -1.13
SNX13-203ENST00000428135 TMEM136Q6ZRR5 245 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 FER1L6-AS1Q8NA97 138 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 HIST1H2BAQ96A08 127 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 C18orf12Q96KH6 178 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 IFT22Q9H7X7 185 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 PLSCR2Q9NRY7 297 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 RPUSD1Q9UJJ7 312 aaKnown RBP8.01□□□□□ -1.13
SNX13-203ENST00000428135 A0A0U1RRA0 63 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 GZMBP10144 247 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 ACTL10Q5JWF8 245 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 C20orf204Q6ZNR8 217 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 FAM19A2Q8N3H0 131 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 CA1P00915 261 aaPredicted RBP8.01□□□□□ -1.13
SNX13-203ENST00000428135 GPX4P36969 197 aaPredicted RBP8.01□□□□□ -1.13
SNX13-203ENST00000428135 TCF23Q7RTU1 214 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 TMEM70Q9BUB7 260 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 TBL2Q9Y4P3 447 aaKnown RBP8.01□□□□□ -1.13
SNX13-203ENST00000428135 ADAMTS9Q9P2N4 1935 aa8.01□□□□□ -1.13
SNX13-203ENST00000428135 MBD3L4A6NDZ8 208 aaPredicted RBP8□□□□□ -1.13
SNX13-203ENST00000428135 MBD3L3A6NE82 208 aaPredicted RBP8□□□□□ -1.13
SNX13-203ENST00000428135 MBD3L5A6NJ08 208 aaPredicted RBP8□□□□□ -1.13
SNX13-203ENST00000428135 M0QZK8 103 aa8□□□□□ -1.13
SNX13-203ENST00000428135 NAT1P18440 290 aa8□□□□□ -1.13
SNX13-203ENST00000428135 SAA4P35542 130 aa8□□□□□ -1.13
SNX13-203ENST00000428135 MBD3L2Q8NHZ7 208 aaPredicted RBP8□□□□□ -1.13
SNX13-203ENST00000428135 GAFA1Q96PS6 74 aa8□□□□□ -1.13
SNX13-203ENST00000428135 ATG101Q9BSB4 218 aa8□□□□□ -1.13
SNX13-203ENST00000428135 VSIRQ9H7M9 311 aa8□□□□□ -1.13
SNX13-203ENST00000428135 CDC42EP3Q9UKI2 254 aa8□□□□□ -1.13
SNX13-203ENST00000428135 HELZP42694 1942 aaKnown RBP8□□□□□ -1.13
SNX13-203ENST00000428135 EXOC3-AS1Q8N2X6 119 aa8□□□□□ -1.13
SNX13-203ENST00000428135 PMCHL2Q9BQD1 86 aa8□□□□□ -1.13
SNX13-203ENST00000428135 RFNGQ9Y644 331 aa8□□□□□ -1.13
SNX13-203ENST00000428135 ARFGEF3Q5TH69 2177 aa8□□□□□ -1.13
SNX13-203ENST00000428135 PTPRDP23468 1912 aa8□□□□□ -1.13
SNX13-203ENST00000428135 NPIPB5A8MRT5 1133 aa8□□□□□ -1.13
SNX13-203ENST00000428135 MT-ND6P03923 174 aa8□□□□□ -1.13
SNX13-203ENST00000428135 SIGLEC15Q6ZMC9 328 aa8□□□□□ -1.13
SNX13-203ENST00000428135 PIP4P2Q8N4L2 257 aa8□□□□□ -1.13
SNX13-203ENST00000428135 SCGB3A1Q96QR1 104 aa8□□□□□ -1.13
SNX13-203ENST00000428135 SCRT1Q9BWW7 348 aa8□□□□□ -1.13
SNX13-203ENST00000428135 IGHV3-64A0A075B6Q5 118 aa8□□□□□ -1.13
SNX13-203ENST00000428135 MALP21145 153 aa8□□□□□ -1.13
SNX13-203ENST00000428135 CCL1P22362 96 aa8□□□□□ -1.13
SNX13-203ENST00000428135 PLA2G5P39877 138 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms