RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 NPY1RP25929 384 aa11.7□□□□□ -0.54
HLA-DQB2-230ENST00000427449 BTCP35070 178 aa11.7□□□□□ -0.54
HLA-DQB2-230ENST00000427449 TFPI2P48307 235 aa11.7□□□□□ -0.54
HLA-DQB2-230ENST00000427449 RND2P52198 227 aa11.7□□□□□ -0.54
HLA-DQB2-230ENST00000427449 RBMS2Q15434 407 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB2-230ENST00000427449 GINS3Q9BRX5 216 aa11.7□□□□□ -0.54
HLA-DQB2-230ENST00000427449 RBKSQ9H477 322 aa11.7□□□□□ -0.54
HLA-DQB2-230ENST00000427449 MCUBQ9NWR8 336 aa11.7□□□□□ -0.54
HLA-DQB2-230ENST00000427449 DNAH6Q9C0G6 4158 aa11.7□□□□□ -0.54
HLA-DQB2-230ENST00000427449 AKR1C4P17516 323 aa11.69□□□□□ -0.54
HLA-DQB2-230ENST00000427449 CCR6P51684 374 aa11.69□□□□□ -0.54
HLA-DQB2-230ENST00000427449 SUB1P53999 127 aaKnown RBP eCLIP11.69□□□□□ -0.54
HLA-DQB2-230ENST00000427449 APOC4P55056 127 aa11.69□□□□□ -0.54
HLA-DQB2-230ENST00000427449 YPEL3P61236 119 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB2-230ENST00000427449 SMCO1Q147U7 214 aa11.69□□□□□ -0.54
HLA-DQB2-230ENST00000427449 BAK1Q16611 211 aa11.69□□□□□ -0.54
HLA-DQB2-230ENST00000427449 LYG2Q86SG7 212 aa11.69□□□□□ -0.54
HLA-DQB2-230ENST00000427449 STPG3Q8N7X2 389 aa11.69□□□□□ -0.54
HLA-DQB2-230ENST00000427449 RNASE11Q8TAA1 199 aaKnown RBP11.69□□□□□ -0.54
HLA-DQB2-230ENST00000427449 UBE2CO00762 179 aa11.68□□□□□ -0.54
HLA-DQB2-230ENST00000427449 SPRY2O43597 315 aa11.68□□□□□ -0.54
HLA-DQB2-230ENST00000427449 NOL3O60936 208 aaKnown RBP11.68□□□□□ -0.54
HLA-DQB2-230ENST00000427449 P2RY1P47900 373 aa11.68□□□□□ -0.54
HLA-DQB2-230ENST00000427449 PPP1R1AQ13522 171 aa11.68□□□□□ -0.54
HLA-DQB2-230ENST00000427449 HEYLQ9NQ87 328 aaPredicted RBP11.68□□□□□ -0.54
HLA-DQB2-230ENST00000427449 IGKV1OR2-108A0A075B7D4 117 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 CEBPZOSA8MTT3 80 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 SLC25A4P12235 298 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 ATF4P18848 351 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 OR10J1P30954 320 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 BMI1P35226 326 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 PYDC2Q56P42 97 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 TMEM128Q5BJH2 165 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 C16orf54Q6UWD8 224 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 LGI3Q8N145 548 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 OR1S2Q8NGQ3 325 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 DTD1Q8TEA8 209 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 DEDD2Q8WXF8 326 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 ENY2Q9NPA8 101 aa11.67□□□□□ -0.54
HLA-DQB2-230ENST00000427449 DUXBA0A1W2PPF3 345 aa11.66□□□□□ -0.54
HLA-DQB2-230ENST00000427449 TOMM40O96008 361 aa11.66□□□□□ -0.54
HLA-DQB2-230ENST00000427449 C4BPBP20851 252 aa11.66□□□□□ -0.54
HLA-DQB2-230ENST00000427449 DEFB131AP59861 70 aa11.66□□□□□ -0.54
HLA-DQB2-230ENST00000427449 LEMD1Q68G75 181 aa11.66□□□□□ -0.54
HLA-DQB2-230ENST00000427449 TRPT1Q86TN4 253 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB2-230ENST00000427449 TOMM5Q8N4H5 51 aa11.66□□□□□ -0.54
HLA-DQB2-230ENST00000427449 NPIPB3Q92617 1050 aa11.66□□□□□ -0.54
HLA-DQB2-230ENST00000427449 BIRC6Q9NR09 4857 aa11.66□□□□□ -0.54
HLA-DQB2-230ENST00000427449 TRAV30A0A087WSZ9 112 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 RPS10-NUDT3A0A1W2PQS6 291 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 SFT2D2O95562 160 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 CD5P06127 495 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 SLC25A6P12236 298 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 NPPCP23582 126 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 TMED4Q7Z7H5 227 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 GRAMD2BQ96HH9 432 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 C17orf77Q96MU5 243 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 SCGB3A2Q96PL1 93 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 KCNIP3Q9Y2W7 256 aa11.65□□□□□ -0.54
HLA-DQB2-230ENST00000427449 MPTX1A8MV57 137 aa11.64□□□□□ -0.55
HLA-DQB2-230ENST00000427449 BUB3O43684 328 aa11.64□□□□□ -0.55
HLA-DQB2-230ENST00000427449 SRPXP78539 464 aa11.64□□□□□ -0.55
HLA-DQB2-230ENST00000427449 GAMTQ14353 236 aa11.64□□□□□ -0.55
HLA-DQB2-230ENST00000427449 METTL26Q96S19 204 aa11.64□□□□□ -0.55
HLA-DQB2-230ENST00000427449 SLC25A21Q9BQT8 299 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQB2-230ENST00000427449 CSTL1Q9H114 145 aa11.64□□□□□ -0.55
HLA-DQB2-230ENST00000427449 U3KQ87 197 aa11.64□□□□□ -0.55
HLA-DQB2-230ENST00000427449 HNRNPCP07910 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
HLA-DQB2-230ENST00000427449 PSG1P11464 419 aa11.63□□□□□ -0.55
HLA-DQB2-230ENST00000427449 FAUP35544 74 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB2-230ENST00000427449 AP3S2P59780 193 aa11.63□□□□□ -0.55
HLA-DQB2-230ENST00000427449 ZNF90Q03938 601 aa11.63□□□□□ -0.55
HLA-DQB2-230ENST00000427449 SOCS3O14543 225 aa11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 NDUFB6O95139 128 aa11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 IL4P05112 153 aa11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 ZNF688P0C7X2 276 aa11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 Q8NAQ8 132 aa11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 CSNK1G2-AS1Q8NCQ2 148 aa11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 LINC00476Q8WZB0 136 aa11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 ACY3Q96HD9 319 aa11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 C11orf68Q9H3H3 251 aaKnown RBP11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 CACFD1Q9UGQ2 172 aa11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 FLVCR2Q9UPI3 526 aa11.62□□□□□ -0.55
HLA-DQB2-230ENST00000427449 DNAH10Q8IVF4 4471 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 CCDC160A6NGH7 325 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 FAM90A26D6RGX4 464 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 IFNA10P01566 189 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 IAPPP10997 89 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 CENPSQ8N2Z9 138 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 THAP8Q8NA92 274 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 OR51G1Q8NGK1 321 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 GATAD1Q8WUU5 269 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 TMEM231Q9H6L2 316 aa11.61□□□□□ -0.55
HLA-DQB2-230ENST00000427449 A0A1W2PS18 150 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 C9orf170A2RU37 121 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 KNCNA6PVL3 124 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 PMS2P5A8MQ11 134 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 ADAP1O75689 374 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 ANXA3P12429 323 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms