RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SBF1O95248 1867 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 TNFRSF6BO95407 300 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 ATP5G3P48201 142 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 ABCA7Q8IZY2 2146 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 PCOLCEQ15113 449 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 PRCDQ00LT1 54 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 PRR32B1ATL7 298 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 ZNF883P0CG24 379 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 LINC00158P58513 81 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 HIST1H4AP62805 103 aaKnown RBP12.09□□□□□ -0.47
PTPN13-203ENST00000427191 RNASE7Q9H1E1 156 aaKnown RBP12.09□□□□□ -0.47
PTPN13-203ENST00000427191 A0A1B0GTI1 187 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 HEPN1Q6WQI6 88 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 SIGLEC15Q6ZMC9 328 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 NEGR1Q7Z3B1 354 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 MSGN1A6NI15 193 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 TGFAP01135 160 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 KLF17Q5JT82 389 aaPredicted RBP12.09□□□□□ -0.47
PTPN13-203ENST00000427191 Q5PR19 223 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 ZNF497Q6ZNH5 498 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 TEX43Q6ZNM6 134 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 RPRMLQ8N4K4 120 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 TRAV8-1A0A0A6YYK1 113 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 C17orf98A8MV24 154 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 SAP25Q8TEE9 199 aa12.09□□□□□ -0.47
PTPN13-203ENST00000427191 ZNF124Q15973 351 aa12.08□□□□□ -0.48
PTPN13-203ENST00000427191 LOC285556D6RIA3 1793 aa12.08□□□□□ -0.48
PTPN13-203ENST00000427191 DOCK8Q8NF50 2099 aa12.08□□□□□ -0.48
PTPN13-203ENST00000427191 IGFBP3P17936 291 aaPredicted RBP12.08□□□□□ -0.48
PTPN13-203ENST00000427191 C2orf82Q6UX34 121 aa12.08□□□□□ -0.48
PTPN13-203ENST00000427191 PRR19A6NJB7 356 aa12.08□□□□□ -0.48
PTPN13-203ENST00000427191 FAM90A2PQ658T7 463 aa12.08□□□□□ -0.48
PTPN13-203ENST00000427191 SPSB3Q6PJ21 355 aa12.08□□□□□ -0.48
PTPN13-203ENST00000427191 ARFGEF3Q5TH69 2177 aa12.08□□□□□ -0.48
PTPN13-203ENST00000427191 BRCA1P38398 1863 aaKnown RBP12.08□□□□□ -0.48
PTPN13-203ENST00000427191 PSG8Q9UQ74 426 aa12.08□□□□□ -0.48
PTPN13-203ENST00000427191 LOC105371267A0A1B0GV96 52 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 RAMP1O60894 148 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 TMEM155Q4W5P6 130 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 TEX38Q6PEX7 206 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 LOC102723996A0A087X1L8 192 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 SAA2-SAA4A0A096LPE2 208 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 IGHV2OR16-5A0A0B4J2B6 119 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 PATE3B3GLJ2 98 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 LDLRAD4O15165 306 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 SAA2P0DJI9 122 aaPredicted RBP12.07□□□□□ -0.48
PTPN13-203ENST00000427191 TRAV5A0A0B4J249 113 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 TIMP3P35625 211 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 MRPL27Q9P0M9 148 aaKnown RBP12.07□□□□□ -0.48
PTPN13-203ENST00000427191 C1QTNF4Q9BXJ3 329 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 TMEM133Q9H2Q1 129 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 MYMXA0A1B0GTQ4 84 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 DSCR9P59020 149 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 HIST1H2BLQ99880 126 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 ZP1P60852 638 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 BSPH1Q075Z2 132 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 CHCHD5Q9BSY4 110 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 NYNRINQ9P2P1 1898 aaKnown RBP12.07□□□□□ -0.48
PTPN13-203ENST00000427191 GPHA2Q96T91 129 aa12.07□□□□□ -0.48
PTPN13-203ENST00000427191 A0A0G2JK05 382 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 RPL32P62910 135 aaKnown RBP12.06□□□□□ -0.48
PTPN13-203ENST00000427191 RBMY1FQ15415 496 aaKnown RBP12.06□□□□□ -0.48
PTPN13-203ENST00000427191 LYPD1Q8N2G4 141 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 LCTP09848 1927 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 VCYO14598 125 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 CECR9P0C854 216 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 PTPRDP23468 1912 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 ZIC3O60481 467 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 ZNF415Q09FC8 603 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 AGMATQ9BSE5 352 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 ZXDCQ2QGD7 858 aaPredicted RBP12.06□□□□□ -0.48
PTPN13-203ENST00000427191 LHFPL4Q7Z7J7 247 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 ST6GALNAC3Q8NDV1 305 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 RNF5Q99942 180 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 IGHV3-48P01763 117 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 GATD1Q8NB37 220 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 DPH3P1Q9H4G8 78 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 C17orf100A8MU93 164 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 OOSP1A8MZH6 123 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 EGR1P18146 543 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 EFNB3Q15768 340 aa12.06□□□□□ -0.48
PTPN13-203ENST00000427191 TRBV20-1A0A075B6N2 111 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 RIPPLY3P57055 190 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 EIF4EBP2Q13542 120 aaPredicted RBP12.05□□□□□ -0.48
PTPN13-203ENST00000427191 EDA2RQ9HAV5 297 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 RNF222A6NCQ9 220 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 RSPO4Q2I0M5 234 aaPredicted RBP12.05□□□□□ -0.48
PTPN13-203ENST00000427191 PAX4O43316 350 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 GZMBP10144 247 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 RPL36AP83881 106 aaKnown RBP12.05□□□□□ -0.48
PTPN13-203ENST00000427191 C1orf194Q5T5A4 169 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 RPL36ALQ969Q0 106 aaKnown RBP12.05□□□□□ -0.48
PTPN13-203ENST00000427191 A0A087WX48 190 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 SP9P0CG40 484 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 CCL1P22362 96 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 PAX8Q06710 450 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 CHCHD2Q9Y6H1 151 aaPredicted RBP12.05□□□□□ -0.48
PTPN13-203ENST00000427191 NOTCH3Q9UM47 2321 aa12.05□□□□□ -0.48
PTPN13-203ENST00000427191 CELA2AP08217 269 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms