RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 ZNF586Q9NXT0 402 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 SPATA45Q537H7 98 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 PAXXQ9BUH6 204 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 NDUFA4L2Q9NRX3 87 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 APOA2P02652 100 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 APCSP02743 223 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 C3orf79P0CE67 100 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 CNTFRP26992 372 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 ERHP84090 104 aaKnown RBP11.61□□□□□ -0.55
ERCC3-202ENST00000426778 Q0VG73 95 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 POU2AF1Q16633 256 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 C10orf113Q5VZT2 155 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 ZNF841Q6ZN19 808 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 OR1B1Q8NGR6 318 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 TMEM208Q9BTX3 173 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 OSTCQ9NRP0 149 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 ZNF257Q9Y2Q1 563 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 ZFHX3Q15911 3703 aa11.61□□□□□ -0.55
ERCC3-202ENST00000426778 SPTBN1Q01082 2364 aaKnown RBP11.6□□□□□ -0.55
ERCC3-202ENST00000426778 SH2D7A6NKC9 451 aaPredicted RBP11.6□□□□□ -0.55
ERCC3-202ENST00000426778 AMY1AP04745 511 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 GATA4P43694 442 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 KCNS1Q96KK3 526 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 ZNF331Q9NQX6 463 aaPredicted RBP11.6□□□□□ -0.55
ERCC3-202ENST00000426778 PSMB11A5LHX3 300 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 TNFSF4P23510 183 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 TCF24Q7RTU0 167 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 LINC00305Q7Z4B0 112 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 NUDT10Q8NFP7 164 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 OR1L8Q8NGR8 309 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 TSKUQ8WUA8 353 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 NUDT11Q96G61 164 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 ZNF714Q96N38 554 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 BET1LQ9NYM9 111 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 COL12A1Q99715 3063 aa11.6□□□□□ -0.55
ERCC3-202ENST00000426778 VWC2LB2RUY7 222 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 RPLP1P05386 114 aaKnown RBP11.59□□□□□ -0.55
ERCC3-202ENST00000426778 C1orf185Q5T7R7 199 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 NIT1Q86X76 327 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 RBMXL3Q8N7X1 1067 aaKnown RBP11.59□□□□□ -0.55
ERCC3-202ENST00000426778 OR5B3Q8NH48 314 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 MUC6Q6W4X9 2439 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 DLL1O00548 723 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 ITGB1BP1O14713 200 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 ESDP10768 282 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 FOXA3P55318 350 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-202ENST00000426778 TNXAQ16473 311 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 NUP35Q8NFH5 326 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 LY96Q9Y6Y9 160 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 IGKV1D-37A0A075B6S9 117 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 A0A1W2PRE2 83 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 SMIM27A0A1W2PRY6 76 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 ZNF324O75467 553 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-202ENST00000426778 BSPH1Q075Z2 132 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 ZNF833PQ6ZTB9 187 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 ZNF329Q86UD4 541 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 KIR3DL3Q8N743 410 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 OR2D3Q8NGH3 330 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 C20orf144Q9BQM9 153 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 TIMM8BQ9Y5J9 83 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-202ENST00000426778 LINC00312Q9Y6C7 94 aa11.59□□□□□ -0.55
ERCC3-202ENST00000426778 A0A1W2PPI3 338 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 PEX7O00628 323 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 LINC00322Q6ZN03 302 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-202ENST00000426778 C18orf32Q8TCD1 76 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 LPAR2Q9HBW0 351 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 ANKHD1Q8IWZ3 2542 aaKnown RBP11.58□□□□□ -0.56
ERCC3-202ENST00000426778 TRAV9-1A0A075B6T8 112 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 DPRXA6NFQ7 191 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 HIGD1CA8MV81 97 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 LYNX1G3V0Z9 82 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 LYNX1P0DP58 116 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 ADIPOQQ15848 244 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 Q56UQ5 140 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 WDR73Q6P4I2 378 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 RNASEKQ6P5S7 137 aaKnown RBP11.58□□□□□ -0.56
ERCC3-202ENST00000426778 PIP4P1Q86T03 277 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 SPACA3Q8IXA5 215 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 RAB9BQ9NP90 201 aa11.58□□□□□ -0.56
ERCC3-202ENST00000426778 C22orf46C9J442 243 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 SLC25A5P05141 298 aaKnown RBP11.57□□□□□ -0.56
ERCC3-202ENST00000426778 ZNF137PP52743 207 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 FAM169BQ8N8A8 192 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 CTSZQ9UBR2 303 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 TRAV8-1A0A0A6YYK1 113 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 PGPA6NDG6 321 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 FAM87AP0C7U9 286 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 C1orf174Q8IYL3 243 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 TXN2Q99757 166 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 CLEC7AQ9BXN2 247 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 GAL3ST2Q9H3Q3 398 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 CHODLQ9H9P2 273 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 CLEC5AQ9NY25 188 aa11.57□□□□□ -0.56
ERCC3-202ENST00000426778 IZUMO1RA6ND01 250 aa11.56□□□□□ -0.56
ERCC3-202ENST00000426778 NKX6-3A6NJ46 265 aa11.56□□□□□ -0.56
ERCC3-202ENST00000426778 Q6ZN92 141 aa11.56□□□□□ -0.56
ERCC3-202ENST00000426778 OSR1Q8TAX0 266 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-202ENST00000426778 ST6GALNAC6Q969X2 333 aa11.56□□□□□ -0.56
ERCC3-202ENST00000426778 FXYD5Q96DB9 178 aa11.56□□□□□ -0.56
ERCC3-202ENST00000426778 MCRIP2Q9BUT9 160 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms