RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 TUBA4BQ9H853 241 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 CACFD1Q9UGQ2 172 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 ALG5Q9Y673 324 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 IGHV3OR16-13A0A075B7E8 117 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 IGHV3-74A0A0B4J1X5 117 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 C7orf66A4D0T2 115 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 NDUFA4O00483 81 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 SSSCA1O60232 199 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 TMEM50AO95807 157 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 MBPP02686 304 aaPredicted RBP9.51□□□□□ -0.89
GPC1-204ENST00000426280 APOHP02749 345 aaPredicted RBP9.51□□□□□ -0.89
GPC1-204ENST00000426280 OPRK1P41145 380 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 MFAP4P55083 255 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 ELLP55199 621 aaPredicted RBP9.51□□□□□ -0.89
GPC1-204ENST00000426280 RGS21Q2M5E4 152 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 GSG1LQ6UXU4 331 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 C2orf50Q96LR7 162 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 FAM110AQ9BQ89 295 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 SRD5A3Q9H8P0 318 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 PAIP2BQ9ULR5 123 aaKnown RBP9.51□□□□□ -0.89
GPC1-204ENST00000426280 RCL1Q9Y2P8 373 aaKnown RBP9.51□□□□□ -0.89
GPC1-204ENST00000426280 UFC1Q9Y3C8 167 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 U3KQ87 197 aa9.51□□□□□ -0.89
GPC1-204ENST00000426280 CORTO00230 105 aa9.5□□□□□ -0.89
GPC1-204ENST00000426280 SSNA1O43805 119 aa9.5□□□□□ -0.89
GPC1-204ENST00000426280 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
GPC1-204ENST00000426280 PAX9P55771 341 aa9.5□□□□□ -0.89
GPC1-204ENST00000426280 SPANXN5Q5MJ07 72 aa9.5□□□□□ -0.89
GPC1-204ENST00000426280 SPSB3Q6PJ21 355 aa9.5□□□□□ -0.89
GPC1-204ENST00000426280 EDA2RQ9HAV5 297 aa9.5□□□□□ -0.89
GPC1-204ENST00000426280 GAR1Q9NY12 217 aaKnown RBP9.5□□□□□ -0.89
GPC1-204ENST00000426280 UBQLN2Q9UHD9 624 aa9.5□□□□□ -0.89
GPC1-204ENST00000426280 SMPXQ9UHP9 88 aa9.5□□□□□ -0.89
GPC1-204ENST00000426280 LSM5Q9Y4Y9 91 aaKnown RBP9.5□□□□□ -0.89
GPC1-204ENST00000426280 K7EMT4 169 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 K7EPK0 472 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 CHEK1O14757 476 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 IFNA4P05014 189 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 IL15RAQ13261 267 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 OXA1LQ15070 435 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 TOMM20LQ6UXN7 152 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 CIB3Q96Q77 187 aaPredicted RBP9.49□□□□□ -0.89
GPC1-204ENST00000426280 ATP6V0BQ99437 205 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 RNF2Q99496 336 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 ZMAT4Q9H898 229 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 PSENENQ9NZ42 101 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 MGAT4CQ9UBM8 478 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 RYR3Q15413 4870 aa9.49□□□□□ -0.89
GPC1-204ENST00000426280 GNG7O60262 68 aa9.48□□□□□ -0.89
GPC1-204ENST00000426280 CCNKO75909 580 aa9.48□□□□□ -0.89
GPC1-204ENST00000426280 H2BFSP57053 126 aa9.48□□□□□ -0.89
GPC1-204ENST00000426280 RAB32Q13637 225 aa9.48□□□□□ -0.89
GPC1-204ENST00000426280 ZNF124Q15973 351 aa9.48□□□□□ -0.89
GPC1-204ENST00000426280 RNASEH2CQ8TDP1 164 aaKnown RBP9.48□□□□□ -0.89
GPC1-204ENST00000426280 MARC2Q969Z3 335 aa9.48□□□□□ -0.89
GPC1-204ENST00000426280 TXN2Q99757 166 aa9.48□□□□□ -0.89
GPC1-204ENST00000426280 RHPN1-AS1Q9BWJ2 59 aa9.48□□□□□ -0.89
GPC1-204ENST00000426280 ZFAND3Q9H8U3 227 aa9.48□□□□□ -0.89
GPC1-204ENST00000426280 DAZ1Q9NQZ3 744 aaKnown RBP9.48□□□□□ -0.89
GPC1-204ENST00000426280 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 IGHV3-66A0A0C4DH42 116 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 IGHV7-4-1A0A0J9YVY3 117 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 TSPAN4O14817 238 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 NUPL2O15504 423 aaKnown RBP9.47□□□□□ -0.89
GPC1-204ENST00000426280 YIF1AO95070 293 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 RND2P52198 227 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 S100A10P60903 97 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 RAB11AP62491 216 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 ODF3L2Q3SX64 289 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 FAM90A2PQ658T7 463 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 PRSS54Q6PEW0 395 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 RBPMS2Q6ZRY4 209 aaKnown RBP9.47□□□□□ -0.89
GPC1-204ENST00000426280 SLC16A13Q7RTY0 426 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 NOXA1Q86UR1 476 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 MUC7Q8TAX7 377 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 SMIM8Q96KF7 97 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 SPATA25Q9BR10 227 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 C11orf1Q9H5F2 150 aa9.47□□□□□ -0.89
GPC1-204ENST00000426280 STRAPQ9Y3F4 350 aaKnown RBP9.47□□□□□ -0.89
GPC1-204ENST00000426280 IGKV3-7A0A075B6H7 116 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 RPS10-NUDT3A0A1W2PQS6 291 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 PMS2P5A8MQ11 134 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 PRSS46E5RG02 174 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 CLN5O75503 358 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 IGKV1-17P01599 117 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 METTL15P1P0C7V9 234 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 CXCL3P19876 107 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 NPBWR1P48145 328 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 FCN2Q15485 313 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 TIGITQ495A1 244 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 LRRC37A5PQ49AS3 106 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 CASC10Q5T4H9 136 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 ZFAND6Q6FIF0 208 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 TMEM116Q8NCL8 245 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 OR4X1Q8NH49 305 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 ST8SIA2Q92186 375 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 NPIPB3Q92617 1050 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 ACY3Q96HD9 319 aa9.46□□□□□ -0.9
GPC1-204ENST00000426280 RAB40CQ96S21 281 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms