RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 TOMM20LQ6UXN7 152 aa10.2□□□□□ -0.78
SNX3-204ENST00000426155 RBPMS2Q6ZRY4 209 aaKnown RBP10.2□□□□□ -0.78
SNX3-204ENST00000426155 LRTM2Q8N967 370 aa10.2□□□□□ -0.78
SNX3-204ENST00000426155 OR52B4Q8NGK2 314 aa10.2□□□□□ -0.78
SNX3-204ENST00000426155 DTD1Q8TEA8 209 aa10.2□□□□□ -0.78
SNX3-204ENST00000426155 OR10C1Q96KK4 312 aa10.2□□□□□ -0.78
SNX3-204ENST00000426155 HYLS1Q96M11 299 aa10.2□□□□□ -0.78
SNX3-204ENST00000426155 RCHY1Q96PM5 261 aa10.2□□□□□ -0.78
SNX3-204ENST00000426155 TUBA4BQ9H853 241 aa10.2□□□□□ -0.78
SNX3-204ENST00000426155 PUS1Q9Y606 427 aaKnown RBP eCLIP10.2□□□□□ -0.78
SNX3-204ENST00000426155 IGHV7-4-1A0A0J9YVY3 117 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 OR11H12B2RN74 326 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 K7EMT4 169 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 CLN5O75503 358 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 ADAP1O75689 374 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 APOHP02749 345 aaPredicted RBP10.19□□□□□ -0.78
SNX3-204ENST00000426155 ANXA7P20073 488 aaKnown RBP10.19□□□□□ -0.78
SNX3-204ENST00000426155 HAGHQ16775 308 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 TIGITQ495A1 244 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 OR4X1Q8NH49 305 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 RNF2Q99496 336 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 TM2D3Q9BRN9 247 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 HIPK2Q9H2X6 1198 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 SRD5A3Q9H8P0 318 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 RETNQ9HD89 108 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 UBQLN2Q9UHD9 624 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 SMPXQ9UHP9 88 aa10.19□□□□□ -0.78
SNX3-204ENST00000426155 NBEAL2Q6ZNJ1 2754 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 IGKV3-7A0A075B6H7 116 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 IGHV3-66A0A0C4DH42 116 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 DUXBA0A1W2PPF3 345 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 C9orf170A2RU37 121 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 RBMY1BA6NDE4 496 aaKnown RBP10.18□□□□□ -0.78
SNX3-204ENST00000426155 RBMY1EA6NEQ0 496 aaKnown RBP10.18□□□□□ -0.78
SNX3-204ENST00000426155 MPTX1A8MV57 137 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 CHEK1O14757 476 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 LYRM1O43325 122 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 PITX3O75364 302 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 IFNA10P01566 189 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 RBMY1DP0C7P1 496 aaKnown RBP10.18□□□□□ -0.78
SNX3-204ENST00000426155 IAPPP10997 89 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 M6PRP20645 277 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 LORP23490 312 aaPredicted RBP10.18□□□□□ -0.78
SNX3-204ENST00000426155 RND2P52198 227 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 UBE2MP61081 183 aaKnown RBP10.18□□□□□ -0.78
SNX3-204ENST00000426155 RRAS2P62070 204 aaPredicted RBP10.18□□□□□ -0.78
SNX3-204ENST00000426155 GGNBP1Q5YKI7 109 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 PRSS54Q6PEW0 395 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 ZNF600Q6ZNG1 722 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 SLC16A13Q7RTY0 426 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 TMEM116Q8NCL8 245 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 WWC2-AS2Q96NR7 200 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 MARVELD1Q9BSK0 173 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 RHPN1-AS1Q9BWJ2 59 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 MAGT1Q9H0U3 335 aa10.18□□□□□ -0.78
SNX3-204ENST00000426155 TRAV14DV4A0A0A6YYC5 116 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 TRAV25A0A0B4J276 109 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 TSPAN4O14817 238 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 IGKV1-17P01599 117 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 OR4E1P0C645 316 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 IGLC1P0CG04 106 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 DHRS2Q13268 280 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 LINC00322Q6ZN03 302 aaPredicted RBP10.17□□□□□ -0.78
SNX3-204ENST00000426155 LILRB2Q8N423 598 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 SUN5Q8TC36 379 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 RNASEH2CQ8TDP1 164 aaKnown RBP10.17□□□□□ -0.78
SNX3-204ENST00000426155 ST8SIA2Q92186 375 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 ACY3Q96HD9 319 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 CITED4Q96RK1 184 aa10.17□□□□□ -0.78
SNX3-204ENST00000426155 SPAG8Q99932 426 aaPredicted RBP10.17□□□□□ -0.78
SNX3-204ENST00000426155 C7orf50Q9BRJ6 194 aaKnown RBP10.17□□□□□ -0.78
SNX3-204ENST00000426155 KMT2CQ8NEZ4 4911 aaKnown RBP10.16□□□□□ -0.78
SNX3-204ENST00000426155 RPS10-NUDT3A0A1W2PQS6 291 aa10.16□□□□□ -0.78
SNX3-204ENST00000426155 C4BPBP20851 252 aa10.16□□□□□ -0.78
SNX3-204ENST00000426155 TFPI2P48307 235 aa10.16□□□□□ -0.78
SNX3-204ENST00000426155 ODF3L2Q3SX64 289 aa10.16□□□□□ -0.78
SNX3-204ENST00000426155 LYG2Q86SG7 212 aa10.16□□□□□ -0.78
SNX3-204ENST00000426155 FAM110AQ9BQ89 295 aa10.16□□□□□ -0.78
SNX3-204ENST00000426155 C20orf85Q9H1P6 137 aa10.16□□□□□ -0.78
SNX3-204ENST00000426155 ZMAT4Q9H898 229 aa10.16□□□□□ -0.78
SNX3-204ENST00000426155 TMED3Q9Y3Q3 217 aa10.16□□□□□ -0.78
SNX3-204ENST00000426155 ALG5Q9Y673 324 aa10.16□□□□□ -0.78
SNX3-204ENST00000426155 INMT-MINDY4F8WBC2 141 aa10.15□□□□□ -0.78
SNX3-204ENST00000426155 SLC25A4P12235 298 aa10.15□□□□□ -0.78
SNX3-204ENST00000426155 ZNF124Q15973 351 aa10.15□□□□□ -0.78
SNX3-204ENST00000426155 C4orf46Q504U0 113 aa10.15□□□□□ -0.78
SNX3-204ENST00000426155 LAMTOR1Q6IAA8 161 aa10.15□□□□□ -0.78
SNX3-204ENST00000426155 CCDC28AQ8IWP9 274 aa10.15□□□□□ -0.78
SNX3-204ENST00000426155 GBGT1Q8N5D6 347 aa10.15□□□□□ -0.78
SNX3-204ENST00000426155 NPIPB3Q92617 1050 aa10.15□□□□□ -0.78
SNX3-204ENST00000426155 GINS3Q9BRX5 216 aa10.15□□□□□ -0.78
SNX3-204ENST00000426155 U3KQ87 197 aa10.15□□□□□ -0.78
SNX3-204ENST00000426155 TRAV6A0A075B6T7 132 aa10.14□□□□□ -0.79
SNX3-204ENST00000426155 H3BP45 60 aa10.14□□□□□ -0.79
SNX3-204ENST00000426155 IFNA4P05014 189 aa10.14□□□□□ -0.79
SNX3-204ENST00000426155 SLC25A6P12236 298 aa10.14□□□□□ -0.79
SNX3-204ENST00000426155 OR10J1P30954 320 aa10.14□□□□□ -0.79
SNX3-204ENST00000426155 AP2S1P53680 142 aaPredicted RBP10.14□□□□□ -0.79
SNX3-204ENST00000426155 FAM90A2PQ658T7 463 aa10.14□□□□□ -0.79
SNX3-204ENST00000426155 TCF24Q7RTU0 167 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms