RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 LGALS9O00182 355 aa18.5■□□□□ 0.55
APOE-202ENST00000425718 OVOL1O14753 267 aa18.5■□□□□ 0.55
APOE-202ENST00000425718 SLC38A11Q08AI6 406 aa18.5■□□□□ 0.55
APOE-202ENST00000425718 MLANAQ16655 118 aa18.5■□□□□ 0.55
APOE-202ENST00000425718 ZNF600Q6ZNG1 722 aa18.5■□□□□ 0.55
APOE-202ENST00000425718 REC114Q7Z4M0 266 aa18.5■□□□□ 0.55
APOE-202ENST00000425718 TMEM144Q7Z5S9 345 aa18.5■□□□□ 0.55
APOE-202ENST00000425718 ELOVL1Q9BW60 279 aa18.5■□□□□ 0.55
APOE-202ENST00000425718 CST7O76096 145 aa18.49■□□□□ 0.55
APOE-202ENST00000425718 SLURP1P55000 103 aa18.49■□□□□ 0.55
APOE-202ENST00000425718 YPEL3P61236 119 aaPredicted RBP18.49■□□□□ 0.55
APOE-202ENST00000425718 EWSR1Q01844 656 aaKnown RBP eCLIP18.49■□□□□ 0.55
APOE-202ENST00000425718 WFDC9Q8NEX5 89 aa18.49■□□□□ 0.55
APOE-202ENST00000425718 RCC1LQ96I51 464 aaKnown RBP18.49■□□□□ 0.55
APOE-202ENST00000425718 ZC4H2Q9NQZ6 224 aa18.49■□□□□ 0.55
APOE-202ENST00000425718 IGSF23A1L1A6 192 aa18.48■□□□□ 0.55
APOE-202ENST00000425718 SMCO3A2RU48 225 aa18.48■□□□□ 0.55
APOE-202ENST00000425718 ZFP92A6NM28 416 aa18.48■□□□□ 0.55
APOE-202ENST00000425718 OR2C1O95371 312 aa18.48■□□□□ 0.55
APOE-202ENST00000425718 IGLC1P0CG04 106 aa18.48■□□□□ 0.55
APOE-202ENST00000425718 RPL12P30050 165 aaKnown RBP18.48■□□□□ 0.55
APOE-202ENST00000425718 ELLP55199 621 aaPredicted RBP18.48■□□□□ 0.55
APOE-202ENST00000425718 THAP8Q8NA92 274 aa18.48■□□□□ 0.55
APOE-202ENST00000425718 INO80EQ8NBZ0 244 aaPredicted RBP18.48■□□□□ 0.55
APOE-202ENST00000425718 TRGV9Q99603 122 aa18.48■□□□□ 0.55
APOE-202ENST00000425718 CHRDL1Q9BU40 450 aa18.48■□□□□ 0.55
APOE-202ENST00000425718 UFC1Q9Y3C8 167 aa18.48■□□□□ 0.55
APOE-202ENST00000425718 TRAV14DV4A0A0A6YYC5 116 aa18.47■□□□□ 0.55
APOE-202ENST00000425718 CFDP00746 253 aaPredicted RBP18.47■□□□□ 0.55
APOE-202ENST00000425718 ADMP35318 185 aa18.47■□□□□ 0.55
APOE-202ENST00000425718 TREML4Q6UXN2 200 aa18.47■□□□□ 0.55
APOE-202ENST00000425718 TMEM217Q8N7C4 229 aa18.47■□□□□ 0.55
APOE-202ENST00000425718 Q8WTZ3 238 aa18.47■□□□□ 0.55
APOE-202ENST00000425718 DLX4Q92988 240 aaPredicted RBP18.47■□□□□ 0.55
APOE-202ENST00000425718 GINS3Q9BRX5 216 aa18.47■□□□□ 0.55
APOE-202ENST00000425718 TMEM147Q9BVK8 224 aa18.47■□□□□ 0.55
APOE-202ENST00000425718 UQCC1Q9NVA1 299 aa18.47■□□□□ 0.55
APOE-202ENST00000425718 MRPL36Q9P0J6 103 aaKnown RBP18.47■□□□□ 0.55
APOE-202ENST00000425718 SYNJ2BPP57105 145 aa18.46■□□□□ 0.55
APOE-202ENST00000425718 RAB31Q13636 194 aa18.46■□□□□ 0.55
APOE-202ENST00000425718 TEPPQ6URK8 271 aa18.46■□□□□ 0.55
APOE-202ENST00000425718 HSPB11Q9Y547 144 aa18.46■□□□□ 0.55
APOE-202ENST00000425718 TRRAPQ9Y4A5 3859 aa18.46■□□□□ 0.55
APOE-202ENST00000425718 CCNKO75909 580 aa18.45■□□□□ 0.54
APOE-202ENST00000425718 DFFBO76075 338 aa18.45■□□□□ 0.54
APOE-202ENST00000425718 INSL3P51460 131 aa18.45■□□□□ 0.54
APOE-202ENST00000425718 ZNF546Q86UE3 836 aa18.45■□□□□ 0.54
APOE-202ENST00000425718 HAPLN4Q86UW8 402 aa18.45■□□□□ 0.54
APOE-202ENST00000425718 OR9G4Q8NGQ1 327 aa18.45■□□□□ 0.54
APOE-202ENST00000425718 TMEM190Q8WZ59 177 aa18.45■□□□□ 0.54
APOE-202ENST00000425718 hCG_2014768A0A024R1R8 64 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 FXYD6-FXYD2A0A087WZ82 144 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 ZNF320A2RRD8 509 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 A8MWP6 167 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 MPDU1O75352 247 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 TOMM40O96008 361 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 IGKV1-17P01599 117 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 S100A7P31151 101 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 BMI1P35226 326 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 SELENOTP62341 195 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 VWC2Q2TAL6 325 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 TIGITQ495A1 244 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 OR5C1Q8NGR4 320 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 MARC2Q969Z3 335 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 AQP10Q96PS8 301 aa18.44■□□□□ 0.54
APOE-202ENST00000425718 NOTCH3Q9UM47 2321 aa18.43■□□□□ 0.54
APOE-202ENST00000425718 K7EMT4 169 aa18.43■□□□□ 0.54
APOE-202ENST00000425718 YIF1AO95070 293 aa18.43■□□□□ 0.54
APOE-202ENST00000425718 RD3LP0DJH9 198 aa18.43■□□□□ 0.54
APOE-202ENST00000425718 NHLH2Q02577 135 aa18.43■□□□□ 0.54
APOE-202ENST00000425718 ARL16Q0P5N6 197 aa18.43■□□□□ 0.54
APOE-202ENST00000425718 C9orf66Q5T8R8 295 aa18.43■□□□□ 0.54
APOE-202ENST00000425718 AKAP14Q86UN6 197 aa18.43■□□□□ 0.54
APOE-202ENST00000425718 TCTE3Q8IZS6 198 aa18.43■□□□□ 0.54
APOE-202ENST00000425718 OR51G1Q8NGK1 321 aa18.42■□□□□ 0.54
APOE-202ENST00000425718 DAZ1Q9NQZ3 744 aaKnown RBP18.42■□□□□ 0.54
APOE-202ENST00000425718 SIGLEC8Q9NYZ4 499 aa18.42■□□□□ 0.54
APOE-202ENST00000425718 ZMAT5Q9UDW3 170 aaKnown RBP18.42■□□□□ 0.54
APOE-202ENST00000425718 PFDN2Q9UHV9 154 aa18.42■□□□□ 0.54
APOE-202ENST00000425718 PUS1Q9Y606 427 aaKnown RBP eCLIP18.42■□□□□ 0.54
APOE-202ENST00000425718 BPIFCQ8NFQ6 507 aa18.41■□□□□ 0.54
APOE-202ENST00000425718 NARS2Q96I59 477 aaKnown RBP18.41■□□□□ 0.54
APOE-202ENST00000425718 VWFP04275 2813 aa18.41■□□□□ 0.54
APOE-202ENST00000425718 IGHV3-35A0A0C4DH35 117 aa18.4■□□□□ 0.54
APOE-202ENST00000425718 SEC14L6B5MCN3 397 aa18.4■□□□□ 0.54
APOE-202ENST00000425718 S100A7AQ86SG5 101 aa18.4■□□□□ 0.54
APOE-202ENST00000425718 ATP5SQ99766 215 aa18.4■□□□□ 0.54
APOE-202ENST00000425718 C20orf24Q9BUV8 137 aa18.4■□□□□ 0.54
APOE-202ENST00000425718 TNFSF18Q9UNG2 199 aa18.4■□□□□ 0.54
APOE-202ENST00000425718 IGKV1D-37A0A075B6S9 117 aa18.39■□□□□ 0.53
APOE-202ENST00000425718 HMSDA8MTL9 139 aa18.39■□□□□ 0.53
APOE-202ENST00000425718 IFNA5P01569 189 aa18.39■□□□□ 0.53
APOE-202ENST00000425718 AP2S1P53680 142 aaPredicted RBP18.39■□□□□ 0.53
APOE-202ENST00000425718 Q5BKY6 102 aa18.39■□□□□ 0.53
APOE-202ENST00000425718 TOMM20LQ6UXN7 152 aa18.39■□□□□ 0.53
APOE-202ENST00000425718 ST6GAL2Q96JF0 529 aa18.39■□□□□ 0.53
APOE-202ENST00000425718 KCNIP2Q9NS61 270 aa18.39■□□□□ 0.53
APOE-202ENST00000425718 MRPL27Q9P0M9 148 aaKnown RBP18.39■□□□□ 0.53
APOE-202ENST00000425718 WDR83OSQ9Y284 106 aa18.39■□□□□ 0.53
APOE-202ENST00000425718 LSM4Q9Y4Z0 139 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms