RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 MFAP4P55083 255 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 PLP1P60201 277 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 MLANAQ16655 118 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 TMEM241Q24JQ0 296 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 GCSAMLQ5JQS6 135 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 CST9LP1Q5W188 147 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 ATRAIDQ6UW56 229 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 PRSS57Q6UWY2 283 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 C16orf82Q7Z2V1 217 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 C15orf54Q8N8G6 183 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 Q8N9W7 124 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 RPUSD4Q96CM3 377 aaKnown RBP7.5□□□□□ -1.21
HMGB4-201ENST00000425537 MBD6Q96DN6 1003 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 ZNF48Q96MX3 618 aaPredicted RBP7.5□□□□□ -1.21
HMGB4-201ENST00000425537 RBM14Q96PK6 669 aaKnown RBP7.5□□□□□ -1.21
HMGB4-201ENST00000425537 TXN2Q99757 166 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 SMIM7Q9BQ49 75 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 TMPRSS5Q9H3S3 457 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 HIF1ANQ9NWT6 349 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 NAT8Q9UHE5 227 aa7.5□□□□□ -1.21
HMGB4-201ENST00000425537 ARHGAP32A7KAX9 2087 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 I3L2K1 104 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 TSPAN4O14817 238 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 OR7C2O60412 319 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 PAX6P26367 422 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 MFAP2P55001 183 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 CD81P60033 236 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 SSBP2P81877 361 aaPredicted RBP7.49□□□□□ -1.21
HMGB4-201ENST00000425537 AKIRIN2Q53H80 203 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 Q5PR19 223 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 OR51G1Q8NGK1 321 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 SGMS2Q8NHU3 365 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 FAM110DQ8TAY7 271 aaPredicted RBP7.49□□□□□ -1.21
HMGB4-201ENST00000425537 AJUBAQ96IF1 538 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 TCEAL7Q9BRU2 100 aa7.49□□□□□ -1.21
HMGB4-201ENST00000425537 SEPSECSQ9HD40 501 aaKnown RBP7.49□□□□□ -1.21
HMGB4-201ENST00000425537 IGLV11-55A0A075B6I3 123 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 IGHV7-81A0A0B4J1V7 117 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 CXorf65A6NEN9 183 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 GNG7O60262 68 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 ANKRD17O75179 2603 aaKnown RBP7.48□□□□□ -1.21
HMGB4-201ENST00000425537 MT-ND4LP03901 98 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 APELAP0DMC3 54 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 YPEL3P61236 119 aaPredicted RBP7.48□□□□□ -1.21
HMGB4-201ENST00000425537 FAM120AOSQ5T036 256 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 FAM90A2PQ658T7 463 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 UNQ5815/PRO19632Q6UWF5 114 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 MIR17HGQ75NE6 70 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 KRTAP1-3Q8IUG1 177 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 MAPK1IP1LQ8NDC0 245 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 WFDC11Q8NEX6 87 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 VN1R17PQ8TDU5 208 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 C17orf50Q8WW18 174 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 CTDSP1Q9GZU7 261 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 SDF2L1Q9HCN8 221 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 HIGD1AQ9Y241 93 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 TMA7Q9Y2S6 64 aaKnown RBP7.48□□□□□ -1.21
HMGB4-201ENST00000425537 ITPR2Q14571 2701 aa7.48□□□□□ -1.21
HMGB4-201ENST00000425537 IGKV1D-37A0A075B6S9 117 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 A0A1W2PRE2 83 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 FAM74A7A6NL05 159 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 K7EIM0 57 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 SMAD7O15105 426 aaKnown RBP7.47□□□□□ -1.21
HMGB4-201ENST00000425537 IGLC1P0CG04 106 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 RD3LP0DJH9 198 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 UBE2G2P60604 165 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 UBE2L3P68036 154 aaKnown RBP7.47□□□□□ -1.21
HMGB4-201ENST00000425537 ZNF674Q2M3X9 581 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 KLK9Q2XQG4 91 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 C5orf56Q8N8D9 126 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 OR5AU1Q8NGC0 362 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 OR1B1Q8NGR6 318 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 Q8WTZ3 238 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 Q96MF0 132 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 ATP6V0BQ99437 205 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 SSX3Q99909 188 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 PAXXQ9BUH6 204 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 TMUB1Q9BVT8 246 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 PARLQ9H300 379 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 OR51M1Q9H341 326 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 ZNF355PQ9NSJ1 428 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 TMEM242Q9NWH2 141 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 C21orf62Q9NYP8 219 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 DOK5Q9P104 306 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 KLK9Q9UKQ9 250 aa7.47□□□□□ -1.21
HMGB4-201ENST00000425537 A0A0U1RQK1 487 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 PSMB11A5LHX3 300 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 PPP1R2P9O14990 202 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 OR2C1O95371 312 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 TOMM40O96008 361 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 TGFAP01135 160 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 IGHV3-48P01763 117 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 ORM2P19652 201 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 GATA2P23769 480 aaPredicted RBP7.46□□□□□ -1.22
HMGB4-201ENST00000425537 FCGR2BP31994 310 aaPredicted RBP7.46□□□□□ -1.22
HMGB4-201ENST00000425537 CRIP2P52943 208 aaPredicted RBP7.46□□□□□ -1.22
HMGB4-201ENST00000425537 ZNF90Q03938 601 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 Q56UQ5 140 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 SPATA31B1PQ5VZV4 182 aa7.46□□□□□ -1.22
HMGB4-201ENST00000425537 RUSC1-AS1Q66K80 236 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms