RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 NIPSNAP3BQ9BS92 247 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 GOLT1BQ9Y3E0 138 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
HLA-DQB3-203ENST00000425319 A0A0B4J293 547 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 CEBPZOSA8MTT3 80 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 FAM25AB3EWG3 89 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 FAM25CB3EWG5 89 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 FAM25GB3EWG6 89 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 IGKV1-39P01597 117 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 IGKV1D-39P04432 117 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 GIG44P09565 113 aaPredicted RBP8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 C4BPBP20851 252 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 OR10J1P30954 320 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 S100A7P31151 101 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 RPS19P39019 145 aaKnown RBP8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 NKX2-1P43699 371 aaPredicted RBP8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 DHODHQ02127 395 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 C1orf134Q5TEV5 83 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 EBLN2Q6P2I7 272 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 OR52E5Q8NH55 327 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 COQ8AQ8NI60 647 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 ATG101Q9BSB4 218 aa8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 C14orf166Q9Y224 244 aaKnown RBP8.83□□□□□ -1
HLA-DQB3-203ENST00000425319 TEX13DA0A0J9YY54 714 aaPredicted RBP8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 A0A1B0GVY2 172 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 FAM90A26D6RGX4 464 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 H3BMM0 161 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 HBE1P02100 147 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 IL4P05112 153 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 TBPP20226 339 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 RND2P52198 227 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 FAM3BP58499 235 aaPredicted RBP8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 MLANAQ16655 118 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 SAMD13Q5VXD3 122 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 GSG1LQ6UXU4 331 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 LINC00052Q96N35 136 aa8.82□□□□□ -1
HLA-DQB3-203ENST00000425319 IGLV2-18A0A075B6J9 118 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 GABARAPH6UMI1 98 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 GABARAPO95166 117 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 IGKV1-5P01602 117 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 HTN3P15516 51 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 LSM3P62310 102 aaKnown RBP8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 IZUMO4Q1ZYL8 232 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 SCGB2B2Q4G0G5 96 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 C2orf83Q53S99 150 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 OR4B1Q8NGF8 309 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 TERB2Q8NHR7 220 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 AP3S1Q92572 193 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 PPP1R14BQ96C90 147 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 TP53RKQ96S44 253 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 TMEM208Q9BTX3 173 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 FNDC4Q9H6D8 234 aaPredicted RBP8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 CELA1Q9UNI1 258 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 KCNIP3Q9Y2W7 256 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 U3KQE9 123 aa8.81□□□□□ -1
HLA-DQB3-203ENST00000425319 PIGBOS1A0A0B4J2F0 54 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 M0QYG6 137 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 RTL8CO15255 209 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 IGKV1-17P01599 117 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 IGLC1P0CG04 106 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 HLA-DRB4P13762 266 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 PI3P19957 117 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 RORCP51449 518 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 DAD1P61803 113 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 OXA1LQ15070 435 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 RRN3P1Q2M238 152 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 SP6Q3SY56 376 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 C15orf53Q8NAA6 179 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 SLC24A4Q8NFF2 622 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 OR51G1Q8NGK1 321 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 GLMPQ8WWB7 406 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 ACY3Q96HD9 319 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 ABHD1Q96SE0 405 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 PBDC1Q9BVG4 233 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 MAGT1Q9H0U3 335 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 KLK11Q9UBX7 282 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 HLA-DRB4X5D2U9 266 aa8.8□□□□□ -1
HLA-DQB3-203ENST00000425319 BUB3O43684 328 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 TOMM40O96008 361 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 IGKV3-20P01619 116 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 UCP1P25874 307 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 ATP5IP56385 69 aaPredicted RBP8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 B2MP61769 119 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 PSG9Q00887 426 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 KLF9Q13886 244 aaPredicted RBP8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 OR8G2PQ6IF36 304 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 PRSS54Q6PEW0 395 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 ZNF705AQ6ZN79 300 aaPredicted RBP8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 FOXI2Q6ZQN5 318 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 NPIPB3Q92617 1050 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 RBPMSQ93062 196 aaKnown RBP8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 CLUHP3Q96NS8 147 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 PLA2G2EQ9NZK7 142 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 U3KQ87 197 aa8.79□□□□□ -1
HLA-DQB3-203ENST00000425319 A0A087WXM4 84 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 ZFP92A6NM28 416 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 SNRPGP15A8MWD9 76 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 RAB3DO95716 219 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 TAS2R19P59542 299 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 BSXQ3C1V8 233 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms