RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SSUH2Q9Y2M2 353 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 NBPF19A0A087WUL8 3843 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 BUB1B-PAK6H3BSN5 160 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 PHOX2AO14813 284 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 TNFRSF13BO14836 293 aaPredicted RBP9.55□□□□□ -0.88
PTPRN-204ENST00000423636 MT-CO2P00403 227 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 KLRB1Q12918 225 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 PMS2P11Q13670 270 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 MRGPRG-AS1Q2M3A8 158 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 VMA21Q3ZAQ7 101 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 NRGNQ92686 78 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 PACRGQ96M98 296 aaPredicted RBP9.55□□□□□ -0.88
PTPRN-204ENST00000423636 CORTO00230 105 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 ZFP36P26651 326 aaKnown RBP9.54□□□□□ -0.88
PTPRN-204ENST00000423636 RPL27AP46776 148 aaKnown RBP9.54□□□□□ -0.88
PTPRN-204ENST00000423636 RPL29P47914 159 aaKnown RBP9.54□□□□□ -0.88
PTPRN-204ENST00000423636 IGFL4Q6B9Z1 124 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 OR10G8Q8NGN5 311 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 TNFRSF19Q9NS68 423 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 DMRT1Q9Y5R6 373 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 SOX21Q9Y651 276 aaPredicted RBP9.54□□□□□ -0.88
PTPRN-204ENST00000423636 NOTCH2Q04721 2471 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 B4DEV8 164 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 USF1P22415 310 aaPredicted RBP9.54□□□□□ -0.88
PTPRN-204ENST00000423636 GNG4P50150 75 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 OR5B3Q8NH48 314 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 TMEM186Q96B77 213 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 C17orf77Q96MU5 243 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 HIST1H2BLQ99880 126 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 SLC25A2Q9BXI2 301 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 CLEC7AQ9BXN2 247 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 KCNIP2Q9NS61 270 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 ANKRD17O75179 2603 aaKnown RBP9.54□□□□□ -0.88
PTPRN-204ENST00000423636 MXRA5Q9NR99 2828 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 IGKV1D-37A0A075B6S9 117 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 DLL1O00548 723 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 MPDU1O75352 247 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 C3orf36Q3SXR2 165 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 TMEM177Q53S58 311 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 C10orf113Q5VZT2 155 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 TEX38Q6PEX7 206 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 DIRC2Q96SL1 478 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 DNAJC4Q9NNZ3 241 aa9.54□□□□□ -0.88
PTPRN-204ENST00000423636 TEX15Q9BXT5 2789 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 PDE6DO43924 150 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 MALSU1Q96EH3 234 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 IGLC7A0M8Q6 106 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 ADMP35318 185 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 AARDQ4LEZ3 155 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 PPP1R27Q86WC6 154 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 EXOC3-AS1Q8N2X6 119 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 OR8B3Q8NGG8 313 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 OR8B2Q96RD0 313 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 SEBOXQ9HB31 216 aaPredicted RBP9.53□□□□□ -0.88
PTPRN-204ENST00000423636 SIGLEC9Q9Y336 463 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 TIMM8BQ9Y5J9 83 aaPredicted RBP9.53□□□□□ -0.88
PTPRN-204ENST00000423636 MUC21A0A0G2JKD1 596 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 MUC21A0A140T8X8 626 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 ISLRO14498 428 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 TIGITQ495A1 244 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 C2orf83Q53S99 150 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 MUC21Q5SSG8 566 aa9.53□□□□□ -0.88
PTPRN-204ENST00000423636 TECRQ9NZ01 308 aaKnown RBP9.53□□□□□ -0.88
PTPRN-204ENST00000423636 ZMAT5Q9UDW3 170 aaKnown RBP9.53□□□□□ -0.88
PTPRN-204ENST00000423636 IGHV3-49A0A0A0MS15 119 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 FAM209BQ5JX69 171 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 TMEM167AQ8TBQ9 72 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
PTPRN-204ENST00000423636 PAXXQ9BUH6 204 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 WNT10AQ9GZT5 417 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 ABCA2Q9BZC7 2435 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 IGHV3-66A0A0C4DH42 116 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 A6NNC1 897 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 FAM90A9PA6NNJ1 464 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 IGHV2-70P01814 119 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 PRB1P04280 392 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 GPR6P46095 362 aaPredicted RBP9.52□□□□□ -0.89
PTPRN-204ENST00000423636 PDPNQ86YL7 162 aa9.52□□□□□ -0.89
PTPRN-204ENST00000423636 SSBP4Q9BWG4 385 aaPredicted RBP9.52□□□□□ -0.89
PTPRN-204ENST00000423636 TRBV24-1A0A075B6N3 115 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 PGPA6NDG6 321 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 AMBPP02760 352 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 C8orf88P0DMB2 117 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 CAMPP49913 170 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 MRPL41Q8IXM3 137 aaKnown RBP9.51□□□□□ -0.89
PTPRN-204ENST00000423636 C22orf15Q8WYQ4 148 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 SRD5A3Q9H8P0 318 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 LINC00574Q9H8X3 128 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 FKBP11Q9NYL4 201 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 ZNF257Q9Y2Q1 563 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 ACANP16112 2415 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 IGLV1-47P01700 117 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 GZMBP10144 247 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 PRRX1P54821 245 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 FAM120AOSQ5T036 256 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 FAM167A-AS1Q96KT0 104 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 PFDN5Q99471 154 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 DOPEY1Q5JWR5 2465 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 ZNF469Q96JG9 3925 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms