RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 TRAV14DV4A0A0A6YYC5 116 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 SMIM9A6NGZ8 99 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 PDCD6O75340 191 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 SAA1P0DJI8 122 aaPredicted RBP3.36□□□□□ -1.87
SFXN1-202ENST00000421887 MGMTP16455 207 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 PRKACGP22612 351 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 PTBP1P26599 531 aaKnown RBP eCLIP3.36□□□□□ -1.87
SFXN1-202ENST00000421887 RPL27AP46776 148 aaKnown RBP3.36□□□□□ -1.87
SFXN1-202ENST00000421887 DAD1P61803 113 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 ZNF85Q03923 595 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 RIGQ13278 110 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 TMED1Q13445 227 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 OXA1LQ15070 435 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 USF2Q15853 346 aaPredicted RBP3.36□□□□□ -1.87
SFXN1-202ENST00000421887 FAM222AQ5U5X8 452 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 GLIPR1L1Q6UWM5 242 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 MOB1BQ7L9L4 216 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 TCF24Q7RTU0 167 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 DHFR2Q86XF0 187 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 JAGN1Q8N5M9 183 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 UBAC2Q8NBM4 344 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 DUSP18Q8NEJ0 188 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 OR8J1Q8NGP2 316 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 VSTM2AQ8TAG5 236 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 ZNF502Q8TBZ5 544 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 PTX4Q96A99 478 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 ADTRPQ96IZ2 230 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 ATP6V1G3Q96LB4 118 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 PDCD1LG2Q9BQ51 273 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 OR2D2Q9H210 308 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 NRN1Q9NPD7 142 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 IMPAD1Q9NX62 359 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 OR1A1Q9P1Q5 309 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 RABAC1Q9UI14 185 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 MGAT4AQ9UM21 535 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 PUS1Q9Y606 427 aaKnown RBP eCLIP3.36□□□□□ -1.87
SFXN1-202ENST00000421887 DNAH17Q9UFH2 4485 aa3.36□□□□□ -1.87
SFXN1-202ENST00000421887 IGLV11-55A0A075B6I3 123 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 IGHV3-49A0A0A0MS15 119 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 IGHV7-4-1A0A0J9YVY3 117 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 METTL21EPA6NDL7 271 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 OXTP01178 125 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 CRYGCP07315 174 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 GIG44P09565 113 aaPredicted RBP3.35□□□□□ -1.87
SFXN1-202ENST00000421887 ANXA3P12429 323 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 CRHBPP24387 322 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 GNRHRP30968 328 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 MAS1LP35410 378 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 FUSP35637 526 aaKnown RBP eCLIP3.35□□□□□ -1.87
SFXN1-202ENST00000421887 DHODHQ02127 395 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 FGL1Q08830 312 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 LINC01620Q4KN68 170 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 Q56UQ5 140 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 ACTL10Q5JWF8 245 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 UBE2UQ5VVX9 321 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 C19orf35Q6ZS72 473 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 SSX7Q7RTT5 188 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 LRRTM1Q86UE6 522 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 HS3ST5Q8IZT8 346 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 CSNK1G2-AS1Q8NCQ2 148 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 VN1R17PQ8TDU5 208 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 FAAP24Q9BTP7 215 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 MAGT1Q9H0U3 335 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 OR51E2Q9H255 320 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 MS4A6AQ9H2W1 248 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 SDHAF2Q9NX18 166 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 XCL2Q9UBD3 114 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 LRP1BQ9NZR2 4599 aa3.35□□□□□ -1.87
SFXN1-202ENST00000421887 IGHV3OR16-13A0A075B7E8 117 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 IGHV3-74A0A0B4J1X5 117 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 TRAV2A0A0B4J234 112 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 FBLL1A6NHQ2 334 aaKnown RBP3.34□□□□□ -1.87
SFXN1-202ENST00000421887 SNTNA6NMZ2 147 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 NUPL2O15504 423 aaKnown RBP3.34□□□□□ -1.87
SFXN1-202ENST00000421887 TNFSF12O43508 249 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 SCGNO76038 276 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 KBTBD11O94819 623 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 ZNF735P0CB33 412 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 FGF9P31371 208 aaPredicted RBP3.34□□□□□ -1.87
SFXN1-202ENST00000421887 SERPINB10P48595 397 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 OR2B8PP59922 312 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 HLA-DRB3P79483 266 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 HAMPP81172 84 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 ARFRP1Q13795 201 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 RCN1Q15293 331 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 FFAR4Q5NUL3 377 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 C6orf201Q7Z4U5 140 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 DEFB107AQ8IZN7 70 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 ACBD7Q8N6N7 88 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 FAM218AQ96MZ4 157 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 GINS3Q9BRX5 216 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 Q9H3A6 140 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 PLEKHJ1Q9NW61 149 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 RPH3ALQ9UNE2 315 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 PRELID3BQ9Y3B1 194 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 LINC00588Q9Y4M8 146 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 RFNGQ9Y644 331 aa3.34□□□□□ -1.87
SFXN1-202ENST00000421887 FAM240BA0A1B0GVZ2 78 aa3.33□□□□□ -1.88
SFXN1-202ENST00000421887 HELTA6NFD8 242 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms