RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 TMEM222Q9H0R3 208 aa13.43□□□□□ -0.26
AC004540.1-203ENST00000421862 CDS2O95674 445 aa13.42□□□□□ -0.26
AC004540.1-203ENST00000421862 HNRNPCP07910 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
AC004540.1-203ENST00000421862 EIF2B2P49770 351 aaKnown RBP13.42□□□□□ -0.26
AC004540.1-203ENST00000421862 YPEL3P61236 119 aaPredicted RBP13.42□□□□□ -0.26
AC004540.1-203ENST00000421862 C2orf83Q53S99 150 aa13.42□□□□□ -0.26
AC004540.1-203ENST00000421862 LINC00336Q6ZUF6 198 aa13.42□□□□□ -0.26
AC004540.1-203ENST00000421862 LHFPL5Q8TAF8 219 aa13.42□□□□□ -0.26
AC004540.1-203ENST00000421862 SEPSECSQ9HD40 501 aaKnown RBP13.42□□□□□ -0.26
AC004540.1-203ENST00000421862 CLEC5AQ9NY25 188 aa13.42□□□□□ -0.26
AC004540.1-203ENST00000421862 A0A1B0GVY2 172 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 SLC25A4P12235 298 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 RORCP51449 518 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 RND2P52198 227 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 DHRS2Q13268 280 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 USF2Q15853 346 aaPredicted RBP13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 PSMG4Q5JS54 123 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 TMEM229BQ8NBD8 167 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 RNASEH2CQ8TDP1 164 aaKnown RBP13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 TMEM170AQ8WVE7 144 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 RAB40CQ96S21 281 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 ABHD1Q96SE0 405 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 EXTL2Q9UBQ6 330 aa13.41□□□□□ -0.26
AC004540.1-203ENST00000421862 FAM25AB3EWG3 89 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 FAM25CB3EWG5 89 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 FAM25GB3EWG6 89 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 FAM90A26D6RGX4 464 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 OR5AC1P0C628 307 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 AP2S1P53680 142 aaPredicted RBP13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 TAS2R19P59542 299 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 C12orf74Q32Q52 190 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 MZT2AQ6P582 158 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 SLC24A4Q8NFF2 622 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 RNASE11Q8TAA1 199 aaKnown RBP13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 MARCH1Q8TCQ1 289 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 GLYATL2Q8WU03 294 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 AP3S1Q92572 193 aa13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 RBPMSQ93062 196 aaKnown RBP13.4□□□□□ -0.26
AC004540.1-203ENST00000421862 PKD1P98161 4303 aa13.39□□□□□ -0.27
AC004540.1-203ENST00000421862 GABARAPO95166 117 aa13.39□□□□□ -0.27
AC004540.1-203ENST00000421862 OR10J1P30954 320 aa13.39□□□□□ -0.27
AC004540.1-203ENST00000421862 Q8WTZ3 238 aa13.39□□□□□ -0.27
AC004540.1-203ENST00000421862 C1QTNF4Q9BXJ3 329 aa13.39□□□□□ -0.27
AC004540.1-203ENST00000421862 NRN1Q9NPD7 142 aa13.39□□□□□ -0.27
AC004540.1-203ENST00000421862 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.39□□□□□ -0.27
AC004540.1-203ENST00000421862 CACNG5Q9UF02 275 aa13.39□□□□□ -0.27
AC004540.1-203ENST00000421862 BUB3O43684 328 aa13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 RAB3DO95716 219 aa13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 IL4P05112 153 aa13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 DHODHQ02127 395 aa13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 SURF2Q15527 256 aaPredicted RBP13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 CTF1Q16619 201 aa13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 SCGB2B2Q4G0G5 96 aa13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 STEAP1BQ6NZ63 245 aa13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 C15orf40Q8WUR7 153 aa13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 RTBDNQ9BSG5 229 aaPredicted RBP13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 NAA60Q9H7X0 242 aa13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 DNAH11Q96DT5 4516 aa13.38□□□□□ -0.27
AC004540.1-203ENST00000421862 DYNC1H1Q14204 4646 aaKnown RBP13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 DEFB131BA0A096LNP1 70 aa13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 H3BMM0 161 aa13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 NXPH3O95157 252 aa13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 TOMM40O96008 361 aa13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 HLA-DRB4P13762 266 aa13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 ZNF182P17025 639 aaPredicted RBP13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 NUTF2P61970 127 aaKnown RBP13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 SNRPD3P62318 126 aaKnown RBP13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 SSBP1Q04837 148 aaKnown RBP13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 GPR107Q5VW38 600 aa13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 ZNF705AQ6ZN79 300 aaPredicted RBP13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 SELENOHQ8IZQ5 122 aaKnown RBP13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 CENPSQ8N2Z9 138 aa13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 NEU1Q99519 415 aa13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 HEYLQ9NQ87 328 aaPredicted RBP13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 HLA-DRB4X5D2U9 266 aa13.37□□□□□ -0.27
AC004540.1-203ENST00000421862 TEX13DA0A0J9YY54 714 aaPredicted RBP13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 GABARAPH6UMI1 98 aa13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 GSTZ1O43708 216 aaPredicted RBP13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 NPY1RP25929 384 aa13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 NMSQ5H8A3 153 aa13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 ETFRF1Q6IPR1 90 aa13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 FAAP20Q6NZ36 180 aa13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 SIGLEC15Q6ZMC9 328 aa13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 GPR146Q96CH1 333 aa13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 SCRT1Q9BWW7 348 aa13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 NAA50Q9GZZ1 169 aaKnown RBP13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 C14orf166Q9Y224 244 aaKnown RBP13.36□□□□□ -0.27
AC004540.1-203ENST00000421862 CRYM-AS1A6NIL9 109 aa13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 ZNF705FA8MVS1 300 aaPredicted RBP13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 ZNF705DP0CH99 300 aaPredicted RBP13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 ZNF705BP0CI00 300 aaPredicted RBP13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 P0DMU3 169 aa13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 FAM231AP0DMU4 169 aa13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 FAM231CP0DMU5 169 aa13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 MRPS10P82664 201 aaKnown RBP13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 MEF2DQ14814 521 aa13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 ZNF767PQ75MW2 155 aa13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 POM121L12Q8N7R1 296 aa13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 MIXL1Q9H2W2 232 aa13.35□□□□□ -0.27
AC004540.1-203ENST00000421862 XCL2Q9UBD3 114 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms