RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 RNF126Q9BV68 326 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 FAM212BQ9NTI7 297 aaPredicted RBP5.81□□□□□ -1.48
VIM-202ENST00000421459 COMMD3Q9UBI1 195 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 A0A1W2PS18 150 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 IGKV3-20P01619 116 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 MED14OSP0DP75 135 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 OPRK1P41145 380 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 HOXA1P49639 335 aaPredicted RBP5.8□□□□□ -1.48
VIM-202ENST00000421459 UCP3P55916 312 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 PIGPP57054 158 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 C16orf54Q6UWD8 224 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 OR4X1Q8NH49 305 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 GLMPQ8WWB7 406 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 GRAMD2BQ96HH9 432 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 TMEM231Q9H6L2 316 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 U3KQE9 123 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 HERC1Q15751 4861 aa5.8□□□□□ -1.48
VIM-202ENST00000421459 IGHV3OR16-12A0A075B7B8 117 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 C3orf85A0A1B0GTC6 90 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 HELTA6NFD8 242 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 INS-IGF2F8WCM5 200 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 CTDSP2O14595 271 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 HPGDSO60760 199 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 NXPH3O95157 252 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 AMBPP02760 352 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 ELK1P19419 428 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 S100GP29377 79 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 AKR1C2P52895 323 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 DHODHQ02127 395 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 USF2Q15853 346 aaPredicted RBP5.79□□□□□ -1.48
VIM-202ENST00000421459 GDF5OSQ5U4N7 250 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 CCDC190Q86UF4 302 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 CENPSQ8N2Z9 138 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 OR4D10Q8NGI6 311 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 TMEM170AQ8WVE7 144 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 NDUFAF3Q9BU61 184 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 MIXL1Q9H2W2 232 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 KLK11Q9UBX7 282 aa5.79□□□□□ -1.48
VIM-202ENST00000421459 FAM90A26D6RGX4 464 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 H3BMM0 161 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 CD3DP04234 171 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 HNRNPCP07910 306 aaKnown RBP eCLIP5.78□□□□□ -1.48
VIM-202ENST00000421459 IGLC1P0CG04 106 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 P0DMU3 169 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 FAM231AP0DMU4 169 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 FAM231CP0DMU5 169 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 TNFSF8P32971 234 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 S100A5P33763 92 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 RCVRNP35243 200 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 RND2P52198 227 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 SUB1P53999 127 aaKnown RBP eCLIP5.78□□□□□ -1.485e-11■■■□□ 15.3
VIM-202ENST00000421459 RND3P61587 244 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 TRIM16LQ309B1 348 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 BSXQ3C1V8 233 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 TMEM41BQ5BJD5 291 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 MZT2AQ6P582 158 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 PRSS54Q6PEW0 395 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 LHFPL1Q86WI0 220 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 LHFPL5Q8TAF8 219 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 S100ZQ8WXG8 99 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 NPIPB3Q92617 1050 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 SOSTQ9BQB4 213 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 PDCD10Q9BUL8 212 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 ENY2Q9NPA8 101 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 AGRNO00468 2067 aa5.78□□□□□ -1.48
VIM-202ENST00000421459 IFNA10P01566 189 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 APOA1P02647 267 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 PRM2P04554 102 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 IL4P05112 153 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 HTN3P15516 51 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 OR10J1P30954 320 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 ZNF846Q147U1 533 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 MEF2DQ14814 521 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 FAAP20Q6NZ36 180 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 Q6ZR54 194 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 OR13C8Q8NGS7 320 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 OR52I2Q8NH67 350 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 MARCH1Q8TCQ1 289 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 Q8WTZ3 238 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 GPR146Q96CH1 333 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 NARS2Q96I59 477 aaKnown RBP5.77□□□□□ -1.49
VIM-202ENST00000421459 WDR12Q9GZL7 423 aaKnown RBP5.77□□□□□ -1.49
VIM-202ENST00000421459 SCPEP1Q9HB40 452 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 PRR13Q9NZ81 148 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 V9GYH0 126 aa5.77□□□□□ -1.49
VIM-202ENST00000421459 ZNF705FA8MVS1 300 aaPredicted RBP5.76□□□□□ -1.49
VIM-202ENST00000421459 FAM25AB3EWG3 89 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 FAM25CB3EWG5 89 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 FAM25GB3EWG6 89 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 F6UB75 175 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 CORTO00230 105 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 RGS5O15539 181 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 BUB3O43684 328 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 OR5AC1P0C628 307 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 ZNF705DP0CH99 300 aaPredicted RBP5.76□□□□□ -1.49
VIM-202ENST00000421459 ZNF705BP0CI00 300 aaPredicted RBP5.76□□□□□ -1.49
VIM-202ENST00000421459 UCP1P25874 307 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 NPY1RP25929 384 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 LGALS9BQ3B8N2 356 aa5.76□□□□□ -1.49
VIM-202ENST00000421459 SCGB2B2Q4G0G5 96 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms