RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CD7P09564 240 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 PRCDQ00LT1 54 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 PIMREGQ9BSJ6 248 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 D6R8Y8 96 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 CCL3L1P16619 93 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 DUTP33316 252 aaKnown RBP10.26□□□□□ -0.77
CLCN4-203ENST00000421085 CENPVQ7Z7K6 275 aaPredicted RBP10.26□□□□□ -0.77
CLCN4-203ENST00000421085 FAM90A1Q86YD7 464 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 GP6Q9HCN6 339 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 CACNA1IQ9P0X4 2223 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 PVRIGQ6DKI7 326 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 SMPXQ9UHP9 88 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 ALPK2Q86TB3 2170 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 NCR2O95944 276 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 IGHV1-2P23083 117 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 KIR3DS1Q14943 382 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 EFEMP2O95967 443 aa10.26□□□□□ -0.77
CLCN4-203ENST00000421085 PRB3Q04118 309 aaPredicted RBP10.26□□□□□ -0.77
CLCN4-203ENST00000421085 TRAV8-1A0A0A6YYK1 113 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 IGKV1-12A0A0C4DH73 117 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 IGKV1D-12P01611 117 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 FAM27E3Q08E93 113 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 ATXN8Q156A1 80 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 RASL11AQ6T310 242 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 LAGE3Q14657 143 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 TDGF1P13385 188 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 RTN4RL2Q86UN3 420 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 OR10W1Q8NGF6 305 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 SEPSECSQ9HD40 501 aaKnown RBP10.25□□□□□ -0.77
CLCN4-203ENST00000421085 COX11Q9Y6N1 276 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 FAM90A9PA6NNJ1 464 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 NPIPB5A8MRT5 1133 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 M0R2P5 195 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 APOBEC3AP31941 199 aaPredicted RBP10.25□□□□□ -0.77
CLCN4-203ENST00000421085 SYS1-DBNDD2H3BUS1 97 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 HAX1O00165 279 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 OCIAD2Q56VL3 154 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 NUP35Q8NFH5 326 aa10.25□□□□□ -0.77
CLCN4-203ENST00000421085 ITLN2Q8WWU7 325 aaPredicted RBP10.25□□□□□ -0.77
CLCN4-203ENST00000421085 SLC25A48Q6ZT89 311 aaKnown RBP10.24□□□□□ -0.77
CLCN4-203ENST00000421085 C8orf46Q8TAG6 207 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 FGF11Q92914 225 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 MGST2Q99735 147 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 SLC50A1Q9BRV3 221 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 A0A0U1RRA0 63 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 LINC01587Q99440 93 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 POLR3KQ9Y2Y1 108 aaPredicted RBP10.24□□□□□ -0.77
CLCN4-203ENST00000421085 TDRD6O60522 2096 aaKnown RBP10.24□□□□□ -0.77
CLCN4-203ENST00000421085 A0A1W2PR77 199 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 F2Z2F3 143 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 LINC01560Q8TB33 94 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 CD28P10747 220 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 PDLIM4P50479 330 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 DPH3Q96FX2 82 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 MCRIP2Q9BUT9 160 aaKnown RBP10.24□□□□□ -0.77
CLCN4-203ENST00000421085 NMSQ5H8A3 153 aa10.24□□□□□ -0.77
CLCN4-203ENST00000421085 NPC2P61916 151 aa10.23□□□□□ -0.77
CLCN4-203ENST00000421085 SSBP2P81877 361 aaPredicted RBP10.23□□□□□ -0.77
CLCN4-203ENST00000421085 C1orf122Q6ZSJ8 110 aa10.23□□□□□ -0.77
CLCN4-203ENST00000421085 CFAP161Q6P656 301 aa10.23□□□□□ -0.77
CLCN4-203ENST00000421085 NBR2O15453 112 aa10.23□□□□□ -0.77
CLCN4-203ENST00000421085 SRSF7Q16629 238 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLCN4-203ENST00000421085 C1orf162Q8NEQ5 155 aaPredicted RBP10.23□□□□□ -0.77
CLCN4-203ENST00000421085 DLX4Q92988 240 aaPredicted RBP10.23□□□□□ -0.77
CLCN4-203ENST00000421085 MTCL1Q9Y4B5 1905 aaKnown RBP10.23□□□□□ -0.77
CLCN4-203ENST00000421085 CD5LO43866 347 aa10.23□□□□□ -0.77
CLCN4-203ENST00000421085 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
CLCN4-203ENST00000421085 MRPL27Q9P0M9 148 aaKnown RBP10.23□□□□□ -0.77
CLCN4-203ENST00000421085 IGHV3-11P01762 117 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 RPRMLQ8N4K4 120 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 ADAMTSL5Q6ZMM2 481 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 EXOC3-AS1Q8N2X6 119 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 SNHG12Q9BXW3 62 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 CABIN1Q9Y6J0 2220 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 C9JQL5 133 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 ZNF138P52744 262 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 KLF17Q5JT82 389 aaPredicted RBP10.22□□□□□ -0.77
CLCN4-203ENST00000421085 FDCSPQ8NFU4 85 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 GGTLC3B5MD39 225 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 IGKV1-5P01602 117 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 CDKN1AP38936 164 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 FAM90A2PQ658T7 463 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 TMEM42Q69YG0 159 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 LYZL1Q6UWQ5 148 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 IGKV2-40A0A087WW87 121 aaPredicted RBP10.22□□□□□ -0.77
CLCN4-203ENST00000421085 SLC25A20O43772 301 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 IGKV2D-40P01614 121 aaPredicted RBP10.22□□□□□ -0.77
CLCN4-203ENST00000421085 LYL1P12980 280 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 FGFBP3Q8TAT2 258 aa10.22□□□□□ -0.77
CLCN4-203ENST00000421085 IGKV1-27A0A075B6S5 117 aa10.21□□□□□ -0.77
CLCN4-203ENST00000421085 BSPH1Q075Z2 132 aa10.21□□□□□ -0.77
CLCN4-203ENST00000421085 SHANK3Q9BYB0 1731 aa10.21□□□□□ -0.77
CLCN4-203ENST00000421085 MST1LQ2TV78 715 aa10.21□□□□□ -0.77
CLCN4-203ENST00000421085 LINC01559Q495D7 138 aa10.21□□□□□ -0.77
CLCN4-203ENST00000421085 TMEM14EPQ6UXP3 125 aa10.21□□□□□ -0.77
CLCN4-203ENST00000421085 TNFRSF6BO95407 300 aa10.21□□□□□ -0.78
CLCN4-203ENST00000421085 CD24P25063 80 aa10.21□□□□□ -0.78
CLCN4-203ENST00000421085 CST9LQ9H4G1 147 aa10.21□□□□□ -0.78
CLCN4-203ENST00000421085 ICE1Q9Y2F5 2266 aa10.21□□□□□ -0.78
CLCN4-203ENST00000421085 PMS2P5A8MQ11 134 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms