RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CRYGBP07316 175 aa7.02□□□□□ -1.29
SNCA-206ENST00000420646 CRYBB3P26998 211 aa7.02□□□□□ -1.29
SNCA-206ENST00000420646 COMPP49747 757 aaPredicted RBP7.02□□□□□ -1.29
SNCA-206ENST00000420646 NDUFA6P56556 154 aa7.02□□□□□ -1.29
SNCA-206ENST00000420646 VMO1Q7Z5L0 202 aa7.02□□□□□ -1.29
SNCA-206ENST00000420646 NHLRC2Q8NBF2 726 aa7.02□□□□□ -1.29
SNCA-206ENST00000420646 BEND2Q8NDZ0 799 aa7.02□□□□□ -1.29
SNCA-206ENST00000420646 OCC1Q8TAD7 63 aa7.02□□□□□ -1.29
SNCA-206ENST00000420646 MXRA5Q9NR99 2828 aa7.02□□□□□ -1.29
SNCA-206ENST00000420646 ABCA2Q9BZC7 2435 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 IGHV3OR16-10A0A075B7F0 116 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 A0A1W2PN81 502 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 TEX22C9J3V5 150 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 H7BYZ3 331 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 SUMO1P63165 101 aaKnown RBP7.01□□□□□ -1.29
SNCA-206ENST00000420646 TPTE2P1Q5T6R2 138 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 FAM71F2Q6NXP2 309 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 DTX2Q86UW9 622 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 OR4X1Q8NH49 305 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 SRSF12Q8WXF0 261 aaKnown RBP7.01□□□□□ -1.29
SNCA-206ENST00000420646 NRGNQ92686 78 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 FRZBQ92765 325 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 TNFRSF14Q92956 283 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 TCEAL7Q9BRU2 100 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 NCBP2LA6PVI3 153 aaKnown RBP7.01□□□□□ -1.29
SNCA-206ENST00000420646 GGTLC3B5MD39 225 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 UBE2CO00762 179 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 MT-CO2P00403 227 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 GALR1P47211 349 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 MMD2Q8IY49 270 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 OR1B1Q8NGR6 318 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 C8orf46Q8TAG6 207 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 NEU4Q8WWR8 484 aaPredicted RBP7.01□□□□□ -1.29
SNCA-206ENST00000420646 RBM14Q96PK6 669 aaKnown RBP7.01□□□□□ -1.29
SNCA-206ENST00000420646 ZNF355PQ9NSJ1 428 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 DPM3Q9P2X0 92 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 SH2D7A6NKC9 451 aaPredicted RBP7.01□□□□□ -1.29
SNCA-206ENST00000420646 B4DEV8 164 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 K7EN84 100 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 SLC17A3O00476 420 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 PDE6DO43924 150 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST1H2BKO60814 126 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST1H2BJP06899 126 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST1H2BOP23527 126 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST1H2BBP33778 126 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 GPX4P36969 197 aaPredicted RBP7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST1H2BDP58876 126 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST1H2BCP62807 126 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST2H2BEQ16778 126 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.01□□□□□ -1.29
SNCA-206ENST00000420646 C1QL4Q86Z23 238 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 TEX45Q8NA69 505 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 OR5AU1Q8NGC0 362 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST1H2BHQ93079 126 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST1H2BNQ99877 126 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 HIST1H2BMQ99879 126 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 DNAJC4Q9NNZ3 241 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 KCNIP2Q9NS61 270 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 TNFRSF19Q9NS68 423 aa7.01□□□□□ -1.29
SNCA-206ENST00000420646 ZNF469Q96JG9 3925 aaPredicted RBP7□□□□□ -1.29
SNCA-206ENST00000420646 PSMB11A5LHX3 300 aa7□□□□□ -1.29
SNCA-206ENST00000420646 PFN1P07737 140 aaKnown RBP7□□□□□ -1.29
SNCA-206ENST00000420646 FRMD6-AS1P0C7T7 363 aa7□□□□□ -1.29
SNCA-206ENST00000420646 MAS1LP35410 378 aa7□□□□□ -1.29
SNCA-206ENST00000420646 OR4A5Q8NH83 315 aa7□□□□□ -1.29
SNCA-206ENST00000420646 BLNKQ8WV28 456 aa7□□□□□ -1.29
SNCA-206ENST00000420646 FAM167A-AS1Q96KT0 104 aa7□□□□□ -1.29
SNCA-206ENST00000420646 SLC25A2Q9BXI2 301 aa7□□□□□ -1.29
SNCA-206ENST00000420646 CXorf65A6NEN9 183 aa7□□□□□ -1.29
SNCA-206ENST00000420646 COX7A2P2O60397 106 aa7□□□□□ -1.29
SNCA-206ENST00000420646 IGHV2-5P01817 119 aa7□□□□□ -1.29
SNCA-206ENST00000420646 TRGC1P0CF51 173 aa7□□□□□ -1.29
SNCA-206ENST00000420646 SUB1P53999 127 aaKnown RBP eCLIP7□□□□□ -1.29
SNCA-206ENST00000420646 CACNG8Q8WXS5 425 aa7□□□□□ -1.29
SNCA-206ENST00000420646 CFHR4Q92496 578 aa7□□□□□ -1.29
SNCA-206ENST00000420646 EAF1Q96JC9 268 aaPredicted RBP7□□□□□ -1.29
SNCA-206ENST00000420646 WNT10AQ9GZT5 417 aa7□□□□□ -1.29
SNCA-206ENST00000420646 TRAV34A0A0B4J273 112 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 IFITM10A6NMD0 228 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 IGHV3-23P01764 117 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 SFTPCP11686 197 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 PRTN3P24158 256 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 SSTP61278 116 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 UBE2L3P68036 154 aaKnown RBP6.99□□□□□ -1.29
SNCA-206ENST00000420646 FAM120AOSQ5T036 256 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 LINC00305Q7Z4B0 112 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 MALSU1Q96EH3 234 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 TECRQ9NZ01 308 aaKnown RBP6.99□□□□□ -1.29
SNCA-206ENST00000420646 JMJD1CQ15652 2540 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 TCRBV4S1A1TA0A5B7 111 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 SPINK4O60575 86 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 CLN5O75503 358 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 TOX4O94842 621 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 RANP62826 216 aaKnown RBP6.99□□□□□ -1.29
SNCA-206ENST00000420646 NDPQ00604 133 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 C10orf113Q5VZT2 155 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 BCL6BQ8N143 479 aaPredicted RBP6.99□□□□□ -1.29
SNCA-206ENST00000420646 OR11H6Q8NGC7 330 aa6.99□□□□□ -1.29
SNCA-206ENST00000420646 RNASEH2CQ8TDP1 164 aaKnown RBP6.99□□□□□ -1.29
SNCA-206ENST00000420646 TLN2Q9Y4G6 2542 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms