RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 J3QLI3 93 aa16.54■□□□□ 0.24
GPC1-202ENST00000420138 CORTO00230 105 aa16.54■□□□□ 0.24
GPC1-202ENST00000420138 MT-CO2P00403 227 aa16.54■□□□□ 0.24
GPC1-202ENST00000420138 RND2P52198 227 aa16.54■□□□□ 0.24
GPC1-202ENST00000420138 CD81P60033 236 aa16.54■□□□□ 0.24
GPC1-202ENST00000420138 ETFRF1Q6IPR1 90 aa16.54■□□□□ 0.24
GPC1-202ENST00000420138 C5orf56Q8N8D9 126 aa16.54■□□□□ 0.24
GPC1-202ENST00000420138 TMEM116Q8NCL8 245 aa16.54■□□□□ 0.24
GPC1-202ENST00000420138 ISOC2Q96AB3 205 aa16.54■□□□□ 0.24
GPC1-202ENST00000420138 RBM14Q96PK6 669 aaKnown RBP16.54■□□□□ 0.24
GPC1-202ENST00000420138 ZFHX3Q15911 3703 aa16.53■□□□□ 0.24
GPC1-202ENST00000420138 IGHV3-21A0A0B4J1V1 117 aa16.53■□□□□ 0.24
GPC1-202ENST00000420138 A0A1W2PPV4 95 aa16.53■□□□□ 0.24
GPC1-202ENST00000420138 NPIPB5A8MRT5 1133 aa16.53■□□□□ 0.24
GPC1-202ENST00000420138 OR2C1O95371 312 aa16.53■□□□□ 0.24
GPC1-202ENST00000420138 PNRC1Q12796 327 aaPredicted RBP16.53■□□□□ 0.24
GPC1-202ENST00000420138 RNF212Q495C1 297 aa16.53■□□□□ 0.24
GPC1-202ENST00000420138 TTC9CQ8N5M4 171 aa16.53■□□□□ 0.24
GPC1-202ENST00000420138 SSX3Q99909 188 aa16.53■□□□□ 0.24
GPC1-202ENST00000420138 RASL11BQ9BPW5 248 aa16.53■□□□□ 0.24
GPC1-202ENST00000420138 B4DEV8 164 aa16.52■□□□□ 0.24
GPC1-202ENST00000420138 AMY1AP04745 511 aa16.52■□□□□ 0.24
GPC1-202ENST00000420138 SMUG1Q53HV7 270 aa16.52■□□□□ 0.24
GPC1-202ENST00000420138 CYP2G1PQ6ZSU1 146 aa16.52■□□□□ 0.24
GPC1-202ENST00000420138 TMEM219Q86XT9 240 aa16.52■□□□□ 0.24
GPC1-202ENST00000420138 FANCD2OSQ96PS1 177 aa16.52■□□□□ 0.24
GPC1-202ENST00000420138 SEPSECSQ9HD40 501 aaKnown RBP16.52■□□□□ 0.24
GPC1-202ENST00000420138 K7EIM0 57 aa16.52■□□□□ 0.23
GPC1-202ENST00000420138 ZNF90Q03938 601 aa16.52■□□□□ 0.23
GPC1-202ENST00000420138 IQCF2Q8IXL9 164 aa16.52■□□□□ 0.23
GPC1-202ENST00000420138 TCRBV4S1A1TA0A5B7 111 aa16.51■□□□□ 0.23
GPC1-202ENST00000420138 PSMB11A5LHX3 300 aa16.51■□□□□ 0.23
GPC1-202ENST00000420138 TMEM250H0YL14 139 aa16.51■□□□□ 0.23
GPC1-202ENST00000420138 SPATA31B1PQ5VZV4 182 aa16.51■□□□□ 0.23
GPC1-202ENST00000420138 CYB5R2Q6BCY4 276 aa16.51■□□□□ 0.23
GPC1-202ENST00000420138 CIARTQ8N365 385 aaPredicted RBP16.51■□□□□ 0.23
GPC1-202ENST00000420138 ITPR3Q14573 2671 aa16.5■□□□□ 0.23
GPC1-202ENST00000420138 SH2D7A6NKC9 451 aaPredicted RBP16.5■□□□□ 0.23
GPC1-202ENST00000420138 FAM24BQ8N5W8 94 aa16.5■□□□□ 0.23
GPC1-202ENST00000420138 OR1L6Q8NGR2 347 aa16.5■□□□□ 0.23
GPC1-202ENST00000420138 GATAD1Q8WUU5 269 aa16.5■□□□□ 0.23
GPC1-202ENST00000420138 CCDC168Q8NDH2 2452 aa16.5■□□□□ 0.23
GPC1-202ENST00000420138 IGLV11-55A0A075B6I3 123 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 LINC01548A6NM66 108 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 ZNF727A8MUV8 499 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 SMAD7O15105 426 aaKnown RBP16.49■□□□□ 0.23
GPC1-202ENST00000420138 FSHBP01225 129 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 STAG3L2P0CL84 134 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 STAG3L3P0CL85 134 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 SDF2L1Q9HCN8 221 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 MOB4Q9Y3A3 225 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 A6NDX4 124 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 PAGE4O60829 102 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 OR4F5Q8NH21 305 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 SGMS2Q8NHU3 365 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 TMEM37Q8WXS4 190 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 YPEL4Q96NS1 127 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 OR4F4Q96R69 305 aa16.49■□□□□ 0.23
GPC1-202ENST00000420138 CXorf65A6NEN9 183 aa16.48■□□□□ 0.23
GPC1-202ENST00000420138 H3BUX3 64 aa16.48■□□□□ 0.23
GPC1-202ENST00000420138 ATP6V0E1O15342 81 aa16.48■□□□□ 0.23
GPC1-202ENST00000420138 RAB5AP20339 215 aa16.48■□□□□ 0.23
GPC1-202ENST00000420138 BCL6BQ8N143 479 aaPredicted RBP16.48■□□□□ 0.23
GPC1-202ENST00000420138 TRGV9Q99603 122 aa16.48■□□□□ 0.23
GPC1-202ENST00000420138 GSX1Q9H4S2 264 aaPredicted RBP16.48■□□□□ 0.23
GPC1-202ENST00000420138 TNFRSF19Q9NS68 423 aa16.48■□□□□ 0.23
GPC1-202ENST00000420138 ZANQ9Y493 2812 aa16.48■□□□□ 0.23
GPC1-202ENST00000420138 MDFIC2A0A1B0GVS7 189 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 C1orf196B1AJZ1 125 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 RAB5BP61020 215 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 OR4X1Q8NH49 305 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 SMIM7Q9BQ49 75 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 NAT8Q9UHE5 227 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 ABCA1O95477 2261 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 CREBBPQ92793 2442 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 IGLC1P0CG04 106 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 RHOBP62745 196 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 OR5T1Q8NG75 326 aa16.47■□□□□ 0.23
GPC1-202ENST00000420138 ZNF469Q96JG9 3925 aaPredicted RBP16.46■□□□□ 0.23
GPC1-202ENST00000420138 CXorf1O96002 111 aa16.46■□□□□ 0.23
GPC1-202ENST00000420138 OR5G3P0C626 314 aa16.46■□□□□ 0.23
GPC1-202ENST00000420138 ARL14EPLP0DKL9 152 aa16.46■□□□□ 0.23
GPC1-202ENST00000420138 BPIFB3P59826 476 aa16.46■□□□□ 0.23
GPC1-202ENST00000420138 SELENOTP62341 195 aa16.46■□□□□ 0.23
GPC1-202ENST00000420138 KLK9Q2XQG4 91 aa16.46■□□□□ 0.23
GPC1-202ENST00000420138 FAM78BQ5VT40 261 aa16.46■□□□□ 0.23
GPC1-202ENST00000420138 MIR17HGQ75NE6 70 aa16.46■□□□□ 0.23
GPC1-202ENST00000420138 KLK9Q9UKQ9 250 aa16.46■□□□□ 0.23
GPC1-202ENST00000420138 C11orf94C9JXX5 98 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 LY6EQ16553 131 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 TMEM241Q24JQ0 296 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 DEFB112Q30KQ8 113 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 PATE2Q6UY27 113 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 C22orf15Q8WYQ4 148 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 FUT9Q9Y231 359 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 TSPAN9O75954 239 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 ZNF674Q2M3X9 581 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 SPNS3Q6ZMD2 512 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 ZFP82Q8N141 532 aa16.45■□□□□ 0.22
GPC1-202ENST00000420138 FAM110DQ8TAY7 271 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms