RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 PRAMEF20Q5VT98 475 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 RASL11AQ6T310 242 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 SMIM15Q7Z3B0 74 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 RPP25LQ8N5L8 163 aaKnown RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 C11orf42Q8N5U0 333 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 ZNF645Q8N7E2 425 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 SIGLECL1Q8N7X8 197 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 NECAP1Q8NC96 275 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 ZNF738Q8NE65 137 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 OR51H1Q8NH63 302 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 DTD1Q8TEA8 209 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 PIGCQ92535 297 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 NAT6Q93015 286 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 APOBEC3DQ96AK3 386 aaPredicted RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 TMEM45BQ96B21 275 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 YPEL2Q96QA6 119 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 OR4C12Q96R67 309 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 NPCDR1Q9BY65 106 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 GNB1LQ9BYB4 327 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 SAMD10Q9BYL1 202 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 DEFB126Q9BYW3 111 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 LINC00470Q9BZP3 86 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 PKIBQ9C010 78 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 OR2H1Q9GZK4 316 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 VSIRQ9H7M9 311 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 UBE2ZQ9H832 354 aaPredicted RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 SLC25A22Q9H936 323 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 WDR54Q9H977 334 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 PATZ1Q9HBE1 687 aaKnown RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 CCL28Q9NRJ3 127 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 SLC35D1Q9NTN3 355 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 IL36BQ9NZH7 164 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 TP53TG3Q9ULZ0 132 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 LAMTOR2Q9Y2Q5 125 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 MRPS16Q9Y3D3 137 aaKnown RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 MPC1Q9Y5U8 109 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 CHCHD2Q9Y6H1 151 aaPredicted RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 CEP192Q8TEP8 1941 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 TRANK1O15050 2925 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 TDRD6O60522 2096 aaKnown RBP2□□□□□ -2.09
VPS41-206ENST00000418457 ATG2BQ96BY7 2078 aa2□□□□□ -2.09
VPS41-206ENST00000418457 CHD3Q12873 2000 aaKnown RBP2□□□□□ -2.09
VPS41-206ENST00000418457 IGHV3OR16-12A0A075B7B8 117 aa2□□□□□ -2.09
VPS41-206ENST00000418457 TRGV10A0A0A0MS01 117 aa2□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1-6A0A0C4DH72 117 aa2□□□□□ -2.09
VPS41-206ENST00000418457 A0A0G2JRQ6 117 aa2□□□□□ -2.09
VPS41-206ENST00000418457 C5orf63A6NC05 138 aa2□□□□□ -2.09
VPS41-206ENST00000418457 LRRC30A6NM36 301 aa2□□□□□ -2.09
VPS41-206ENST00000418457 ANKRD30BLA7E2S9 258 aa2□□□□□ -2.09
VPS41-206ENST00000418457 FNDC10F2Z333 226 aa2□□□□□ -2.09
VPS41-206ENST00000418457 G3V3Y1 287 aa2□□□□□ -2.09
VPS41-206ENST00000418457 J3QT63 122 aa2□□□□□ -2.09
VPS41-206ENST00000418457 FCN1O00602 326 aa2□□□□□ -2.09
VPS41-206ENST00000418457 TCF21O43680 179 aa2□□□□□ -2.09
VPS41-206ENST00000418457 RHBDL1O75783 438 aa2□□□□□ -2.09
VPS41-206ENST00000418457 S1PR2O95136 353 aa2□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1D-33P01593 117 aa2□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1-33P01594 117 aa2□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1-39P01597 117 aa2□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1-5P01602 117 aa2□□□□□ -2.09
VPS41-206ENST00000418457 HLA-DQA1P01909 254 aa2□□□□□ -2.09
VPS41-206ENST00000418457 PPBPP02775 128 aa2□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1D-39P04432 117 aa2□□□□□ -2.09
VPS41-206ENST00000418457 GPX1P07203 203 aa2□□□□□ -2.09
VPS41-206ENST00000418457 CD55P08174 381 aa2□□□□□ -2.09
VPS41-206ENST00000418457 P0C879 139 aa2□□□□□ -2.09
VPS41-206ENST00000418457 STAG3L2P0CL84 134 aa2□□□□□ -2.09
VPS41-206ENST00000418457 STAG3L3P0CL85 134 aa2□□□□□ -2.09
VPS41-206ENST00000418457 IGLC2P0DOY2 106 aa2□□□□□ -2.09
VPS41-206ENST00000418457 IGLC3P0DOY3 106 aa2□□□□□ -2.09
VPS41-206ENST00000418457 TDGF1P13385 188 aa2□□□□□ -2.09
VPS41-206ENST00000418457 ARR3P36575 388 aa2□□□□□ -2.09
VPS41-206ENST00000418457 CTRLP40313 264 aa2□□□□□ -2.09
VPS41-206ENST00000418457 OPRK1P41145 380 aa2□□□□□ -2.09
VPS41-206ENST00000418457 REG1BP48304 166 aa2□□□□□ -2.09
VPS41-206ENST00000418457 GNG10P50151 68 aa2□□□□□ -2.09
VPS41-206ENST00000418457 LHX2P50458 406 aa2□□□□□ -2.09
VPS41-206ENST00000418457 SSR4P51571 173 aa2□□□□□ -2.09
VPS41-206ENST00000418457 CCL11P51671 97 aa2□□□□□ -2.09
VPS41-206ENST00000418457 PRRX1P54821 245 aa2□□□□□ -2.09
VPS41-206ENST00000418457 ATP5IP56385 69 aaPredicted RBP2□□□□□ -2.09
VPS41-206ENST00000418457 CARD18P57730 90 aa2□□□□□ -2.09
VPS41-206ENST00000418457 GNG3P63215 75 aa2□□□□□ -2.09
VPS41-206ENST00000418457 PSG4Q00888 419 aa2□□□□□ -2.09
VPS41-206ENST00000418457 PLGLB1Q02325 96 aa2□□□□□ -2.09
VPS41-206ENST00000418457 PRSS8Q16651 343 aa2□□□□□ -2.09
VPS41-206ENST00000418457 Q1RN00 199 aa2□□□□□ -2.09
VPS41-206ENST00000418457 HLA-DRB5Q30154 266 aa2□□□□□ -2.09
VPS41-206ENST00000418457 SPATA45Q537H7 98 aa2□□□□□ -2.09
VPS41-206ENST00000418457 PHYHD1Q5SRE7 291 aa2□□□□□ -2.09
VPS41-206ENST00000418457 RAET1LQ5VY80 246 aa2□□□□□ -2.09
VPS41-206ENST00000418457 OR8G2PQ6IF36 304 aa2□□□□□ -2.09
VPS41-206ENST00000418457 CLEC2AQ6UVW9 174 aa2□□□□□ -2.09
VPS41-206ENST00000418457 AAED1Q7RTV5 226 aa2□□□□□ -2.09
VPS41-206ENST00000418457 MRPL21Q7Z2W9 205 aaKnown RBP2□□□□□ -2.09
VPS41-206ENST00000418457 LRP11Q86VZ4 500 aa2□□□□□ -2.09
VPS41-206ENST00000418457 BAGE3Q86Y29 109 aa2□□□□□ -2.09
VPS41-206ENST00000418457 BAGE2Q86Y30 109 aa2□□□□□ -2.09
VPS41-206ENST00000418457 CALHM1Q8IU99 346 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms