RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 SLC25A4P12235 298 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 ATF4P18848 351 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-210ENST00000416778 RPL11P62913 178 aaKnown RBP13.13□□□□□ -0.31
CPNE1-210ENST00000416778 KLF9Q13886 244 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-210ENST00000416778 FAM24BQ8N5W8 94 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 METTL26Q96S19 204 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 TMEM231Q9H6L2 316 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 SHPKQ9UHJ6 478 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 JTBO76095 146 aa13.12□□□□□ -0.31
CPNE1-210ENST00000416778 NXPH3O95157 252 aa13.12□□□□□ -0.31
CPNE1-210ENST00000416778 CCR6P51684 374 aa13.12□□□□□ -0.31
CPNE1-210ENST00000416778 DEFB131AP59861 70 aa13.12□□□□□ -0.31
CPNE1-210ENST00000416778 YPEL3P61236 119 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-210ENST00000416778 RBMS2Q15434 407 aaKnown RBP13.12□□□□□ -0.31
CPNE1-210ENST00000416778 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
CPNE1-210ENST00000416778 OR1S2Q8NGQ3 325 aa13.12□□□□□ -0.31
CPNE1-210ENST00000416778 HSPB7Q9UBY9 170 aa13.12□□□□□ -0.31
CPNE1-210ENST00000416778 RND2P52198 227 aa13.11□□□□□ -0.31
CPNE1-210ENST00000416778 NOXA1Q86UR1 476 aa13.11□□□□□ -0.31
CPNE1-210ENST00000416778 Q8WTZ3 238 aa13.11□□□□□ -0.31
CPNE1-210ENST00000416778 NPIPB3Q92617 1050 aa13.11□□□□□ -0.31
CPNE1-210ENST00000416778 U3KQ87 197 aa13.11□□□□□ -0.31
CPNE1-210ENST00000416778 K7EQG2 157 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 SCGB2A1O75556 95 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 NPY1RP25929 384 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 OR10J1P30954 320 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 P2RY1P47900 373 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 SMCO1Q147U7 214 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 PYDC2Q56P42 97 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 LEMD1Q68G75 181 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 ETFRF1Q6IPR1 90 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 LGI3Q8N145 548 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 GATAD1Q8WUU5 269 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 RBKSQ9H477 322 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 RABAC1Q9UI14 185 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 V9GYH0 126 aa13.1□□□□□ -0.31
CPNE1-210ENST00000416778 CEMP1Q6PRD7 247 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-210ENST00000416778 RARRES2Q99969 163 aa13.09□□□□□ -0.31
CPNE1-210ENST00000416778 CXorf65A6NEN9 183 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 PITX3O75364 302 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 IFNA10P01566 189 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 ANXA3P12429 323 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 PMS2P11Q13670 270 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 ZNF79Q15937 498 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 TMEM128Q5BJH2 165 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 C16orf54Q6UWD8 224 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 TOMM5Q8N4H5 51 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 DTD1Q8TEA8 209 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 DCANP1Q8TF63 244 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 GRAMD2BQ96HH9 432 aa13.08□□□□□ -0.32
CPNE1-210ENST00000416778 ALMS1Q8TCU4 4167 aa13.07□□□□□ -0.32
CPNE1-210ENST00000416778 HNRNPCP07910 306 aaKnown RBP eCLIP13.07□□□□□ -0.328e-7■■■□□ 18.2
CPNE1-210ENST00000416778 GIG44P09565 113 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-210ENST00000416778 RD3LP0DJH9 198 aa13.07□□□□□ -0.32
CPNE1-210ENST00000416778 FAUP35544 74 aaKnown RBP13.07□□□□□ -0.32
CPNE1-210ENST00000416778 ATP5IP56385 69 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-210ENST00000416778 AP3S2P59780 193 aa13.07□□□□□ -0.32
CPNE1-210ENST00000416778 SRPXP78539 464 aa13.07□□□□□ -0.32
CPNE1-210ENST00000416778 CCDC190Q86UF4 302 aa13.07□□□□□ -0.32
CPNE1-210ENST00000416778 STXBP6Q8NFX7 210 aa13.07□□□□□ -0.32
CPNE1-210ENST00000416778 OR11H2Q8NH07 326 aa13.07□□□□□ -0.32
CPNE1-210ENST00000416778 NARS2Q96I59 477 aaKnown RBP13.07□□□□□ -0.32
CPNE1-210ENST00000416778 EPPK1P58107 5090 aaKnown RBP13.07□□□□□ -0.32
CPNE1-210ENST00000416778 GPX4P36969 197 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-210ENST00000416778 USF2Q15853 346 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-210ENST00000416778 TMED4Q7Z7H5 227 aa13.06□□□□□ -0.32
CPNE1-210ENST00000416778 TMEM217Q8N7C4 229 aa13.06□□□□□ -0.32
CPNE1-210ENST00000416778 LRTM2Q8N967 370 aa13.06□□□□□ -0.32
CPNE1-210ENST00000416778 GLMPQ8WWB7 406 aa13.06□□□□□ -0.32
CPNE1-210ENST00000416778 ACY3Q96HD9 319 aa13.06□□□□□ -0.32
CPNE1-210ENST00000416778 SLC25A21Q9BQT8 299 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-210ENST00000416778 RBM38Q9H0Z9 239 aaKnown RBP13.06□□□□□ -0.32
CPNE1-210ENST00000416778 NUPR2A6NF83 97 aa13.05□□□□□ -0.32
CPNE1-210ENST00000416778 HELTA6NFD8 242 aa13.05□□□□□ -0.32
CPNE1-210ENST00000416778 BUB3O43684 328 aa13.05□□□□□ -0.32
CPNE1-210ENST00000416778 TOMM40O96008 361 aa13.05□□□□□ -0.32
CPNE1-210ENST00000416778 CA1P00915 261 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-210ENST00000416778 PSG1P11464 419 aa13.05□□□□□ -0.32
CPNE1-210ENST00000416778 S100A5P33763 92 aa13.05□□□□□ -0.32
CPNE1-210ENST00000416778 AP2S1P53680 142 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-210ENST00000416778 GAMTQ14353 236 aa13.05□□□□□ -0.32
CPNE1-210ENST00000416778 STHQ8IWL8 128 aa13.05□□□□□ -0.32
CPNE1-210ENST00000416778 OR1S1Q8NH92 325 aa13.05□□□□□ -0.32
CPNE1-210ENST00000416778 DEDD2Q8WXF8 326 aa13.05□□□□□ -0.32
CPNE1-210ENST00000416778 PIGBOS1A0A0B4J2F0 54 aa13.04□□□□□ -0.32
CPNE1-210ENST00000416778 DUXBA0A1W2PPF3 345 aa13.04□□□□□ -0.32
CPNE1-210ENST00000416778 CCDC160A6NGH7 325 aa13.04□□□□□ -0.32
CPNE1-210ENST00000416778 IFNA4P05014 189 aa13.04□□□□□ -0.32
CPNE1-210ENST00000416778 IL4P05112 153 aa13.04□□□□□ -0.32
CPNE1-210ENST00000416778 ZNF688P0C7X2 276 aa13.04□□□□□ -0.32
CPNE1-210ENST00000416778 SLC25A6P12236 298 aa13.04□□□□□ -0.32
CPNE1-210ENST00000416778 DHRS2Q13268 280 aa13.04□□□□□ -0.32
CPNE1-210ENST00000416778 TRPT1Q86TN4 253 aaKnown RBP13.04□□□□□ -0.32
CPNE1-210ENST00000416778 IGKV1D-37A0A075B6S9 117 aa13.03□□□□□ -0.32
CPNE1-210ENST00000416778 KNCNA6PVL3 124 aa13.03□□□□□ -0.32
CPNE1-210ENST00000416778 EIF2B2P49770 351 aaKnown RBP13.03□□□□□ -0.32
CPNE1-210ENST00000416778 LINC00476Q8WZB0 136 aa13.03□□□□□ -0.32
CPNE1-210ENST00000416778 RAB40CQ96S21 281 aa13.03□□□□□ -0.32
CPNE1-210ENST00000416778 ZNF701M0R085 212 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms