RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 IGKV1-17P01599 117 aa13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 IGLC1P0CG04 106 aa13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 OR10J1P30954 320 aa13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 GPX4P36969 197 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 C12orf45Q8N5I9 185 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 NPIPB3Q92617 1050 aa13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 ACY3Q96HD9 319 aa13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 SLC35E1Q96K37 410 aa13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 SMPXQ9UHP9 88 aa13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 PAIP2BQ9ULR5 123 aaKnown RBP13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 SCAF4O95104 1147 aaKnown RBP13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 IL5P05113 134 aa13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 CD81P60033 236 aa13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 POLR2GP62487 172 aaKnown RBP eCLIP13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 TIGITQ495A1 244 aa13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 NRARPQ7Z6K4 114 aa13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 ZBTB8BQ8NAP8 495 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 ZFAND3Q9H8U3 227 aa13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 GPN1Q9HCN4 374 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 GSKIPQ9P0R6 139 aa13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 STRAPQ9Y3F4 350 aaKnown RBP13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 SELENOKQ9Y6D0 94 aa13.55□□□□□ -0.24
SEMA3B-201ENST00000416295 A8MZ25 164 aa13.54□□□□□ -0.24
SEMA3B-201ENST00000416295 SSSCA1O60232 199 aa13.54□□□□□ -0.24
SEMA3B-201ENST00000416295 SCGB1D2O95969 90 aa13.54□□□□□ -0.24
SEMA3B-201ENST00000416295 IGHV4-30-4P0DP06 118 aa13.54□□□□□ -0.24
SEMA3B-201ENST00000416295 YPEL3P61236 119 aaPredicted RBP13.54□□□□□ -0.24
SEMA3B-201ENST00000416295 SPANXN5Q5MJ07 72 aa13.54□□□□□ -0.24
SEMA3B-201ENST00000416295 Q8WTZ3 238 aa13.54□□□□□ -0.24
SEMA3B-201ENST00000416295 SPAG8Q99932 426 aaPredicted RBP13.54□□□□□ -0.24
SEMA3B-201ENST00000416295 NEURL2Q9BR09 285 aa13.54□□□□□ -0.24
SEMA3B-201ENST00000416295 RHPN1-AS1Q9BWJ2 59 aa13.54□□□□□ -0.24
SEMA3B-201ENST00000416295 CCSO14618 274 aa13.53□□□□□ -0.24
SEMA3B-201ENST00000416295 CHEK1O14757 476 aa13.53□□□□□ -0.24
SEMA3B-201ENST00000416295 TSPAN4O14817 238 aa13.53□□□□□ -0.24
SEMA3B-201ENST00000416295 FRMD6-AS1P0C7T7 363 aa13.53□□□□□ -0.24
SEMA3B-201ENST00000416295 NHLRC4P0CG21 123 aaPredicted RBP13.53□□□□□ -0.24
SEMA3B-201ENST00000416295 METTL26Q96S19 204 aa13.53□□□□□ -0.24
SEMA3B-201ENST00000416295 RAB40CQ96S21 281 aa13.53□□□□□ -0.24
SEMA3B-201ENST00000416295 TMEM231Q9H6L2 316 aa13.53□□□□□ -0.24
SEMA3B-201ENST00000416295 PSENENQ9NZ42 101 aa13.53□□□□□ -0.24
SEMA3B-201ENST00000416295 C5orf51A6NDU8 294 aa13.52□□□□□ -0.25
SEMA3B-201ENST00000416295 FAM25EA8MYX2 175 aa13.52□□□□□ -0.25
SEMA3B-201ENST00000416295 H3BP45 60 aa13.52□□□□□ -0.25
SEMA3B-201ENST00000416295 PRAF2O60831 178 aa13.52□□□□□ -0.25
SEMA3B-201ENST00000416295 CD5P06127 495 aa13.52□□□□□ -0.25
SEMA3B-201ENST00000416295 NPPCP23582 126 aa13.52□□□□□ -0.25
SEMA3B-201ENST00000416295 GAMTQ14353 236 aa13.52□□□□□ -0.25
SEMA3B-201ENST00000416295 SMIM8Q96KF7 97 aa13.52□□□□□ -0.25
SEMA3B-201ENST00000416295 TUBA4BQ9H853 241 aa13.52□□□□□ -0.25
SEMA3B-201ENST00000416295 IGHV3-49A0A0A0MS15 119 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 ZFP92A6NM28 416 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 INMT-MINDY4F8WBC2 141 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 TOMM40O96008 361 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 FABP1P07148 127 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 CD7P09564 240 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 RD3LP0DJH9 198 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 TAS2R30P59541 319 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 NARS2Q96I59 477 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 RNF2Q99496 336 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 VSIRQ9H7M9 311 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 C19orf73Q9NVV2 129 aa13.51□□□□□ -0.25
SEMA3B-201ENST00000416295 A0A1W2PS18 150 aa13.5□□□□□ -0.25
SEMA3B-201ENST00000416295 OR4C46A6NHA9 309 aa13.5□□□□□ -0.25
SEMA3B-201ENST00000416295 SNRPGP15A8MWD9 76 aa13.5□□□□□ -0.25
SEMA3B-201ENST00000416295 PRSS46E5RG02 174 aa13.5□□□□□ -0.25
SEMA3B-201ENST00000416295 MBPP02686 304 aaPredicted RBP13.5□□□□□ -0.25
SEMA3B-201ENST00000416295 CRYBB3P26998 211 aa13.5□□□□□ -0.25
SEMA3B-201ENST00000416295 GSG1LQ6UXU4 331 aa13.5□□□□□ -0.25
SEMA3B-201ENST00000416295 C2orf50Q96LR7 162 aa13.5□□□□□ -0.25
SEMA3B-201ENST00000416295 MARVELD1Q9BSK0 173 aa13.5□□□□□ -0.25
SEMA3B-201ENST00000416295 RCL1Q9Y2P8 373 aaKnown RBP13.5□□□□□ -0.25
SEMA3B-201ENST00000416295 COL7A1Q02388 2944 aa13.49□□□□□ -0.25
SEMA3B-201ENST00000416295 IGHV3OR16-13A0A075B7E8 117 aa13.49□□□□□ -0.25
SEMA3B-201ENST00000416295 IGHV3-74A0A0B4J1X5 117 aa13.49□□□□□ -0.25
SEMA3B-201ENST00000416295 OR11H12B2RN74 326 aa13.49□□□□□ -0.25
SEMA3B-201ENST00000416295 TSC22D2O75157 780 aa13.49□□□□□ -0.25
SEMA3B-201ENST00000416295 ST8SIA2Q92186 375 aa13.49□□□□□ -0.25
SEMA3B-201ENST00000416295 ASCL2Q99929 193 aa13.49□□□□□ -0.25
SEMA3B-201ENST00000416295 APOHP02749 345 aaPredicted RBP13.48□□□□□ -0.25
SEMA3B-201ENST00000416295 IL4P05112 153 aa13.48□□□□□ -0.25
SEMA3B-201ENST00000416295 PSG1P11464 419 aa13.48□□□□□ -0.25
SEMA3B-201ENST00000416295 PAX9P55771 341 aa13.48□□□□□ -0.25
SEMA3B-201ENST00000416295 TCF24Q7RTU0 167 aa13.48□□□□□ -0.25
SEMA3B-201ENST00000416295 OR51G1Q8NGK1 321 aa13.48□□□□□ -0.25
SEMA3B-201ENST00000416295 GRAMD2BQ96HH9 432 aa13.48□□□□□ -0.25
SEMA3B-201ENST00000416295 TRGV9Q99603 122 aa13.48□□□□□ -0.25
SEMA3B-201ENST00000416295 IGKV1D-37A0A075B6S9 117 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 L7N2F9 121 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 HNRNPCP07910 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 VAMP2P63027 116 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 PAFAH1B2P68402 229 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 AKR1C1Q04828 323 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 FAM90A2PQ658T7 463 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 OR8G2PQ6IF36 304 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 TMEM14EPQ6UXP3 125 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 ACOT7LQ6ZUV0 252 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 SBSPONQ8IVN8 264 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 DEFB125Q8N687 156 aa13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 THAP8Q8NA92 274 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms