RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 IGHV3-72A0A0B4J1Y9 119 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 TNFSF12O43508 249 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 KIR2DS2P43631 304 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 ARL16Q0P5N6 197 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 HAPLN4Q86UW8 402 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 MRPL41Q8IXM3 137 aaKnown RBP11.59□□□□□ -0.55
SGCE-202ENST00000415788 DDB2Q92466 427 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 OR4C12Q96R67 309 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 IMMP2LQ96T52 175 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 GPHA2Q96T91 129 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 SLC35D1Q9NTN3 355 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 VPREB3Q9UKI3 123 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 ANK3Q12955 4377 aaKnown RBP11.59□□□□□ -0.55
SGCE-202ENST00000415788 DNAJC9-AS1A6NH13 148 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 LINC00473A8K010 186 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 M0QZK8 103 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 MOSP00540 346 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 IGKV1D-33P01593 117 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 IGKV1-33P01594 117 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 HES1Q14469 280 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 GBGT1Q8N5D6 347 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 R3HDM4Q96D70 268 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 RNF5Q99942 180 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 PARLQ9H300 379 aa11.59□□□□□ -0.55
SGCE-202ENST00000415788 LIN7CQ9NUP9 197 aaKnown RBP11.59□□□□□ -0.55
SGCE-202ENST00000415788 IAPPP10997 89 aa11.58□□□□□ -0.56
SGCE-202ENST00000415788 CNN1P51911 297 aaKnown RBP11.58□□□□□ -0.56
SGCE-202ENST00000415788 SLC38A11Q08AI6 406 aa11.58□□□□□ -0.56
SGCE-202ENST00000415788 Q6ZRM9 215 aa11.58□□□□□ -0.56
SGCE-202ENST00000415788 NECAP1Q8NC96 275 aa11.58□□□□□ -0.56
SGCE-202ENST00000415788 OR4C13Q8NGP0 309 aa11.58□□□□□ -0.56
SGCE-202ENST00000415788 OR51H1Q8NH63 302 aa11.58□□□□□ -0.56
SGCE-202ENST00000415788 RPUSD4Q96CM3 377 aaKnown RBP11.58□□□□□ -0.56
SGCE-202ENST00000415788 KIR2DL5BA0A0G2JN68 375 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 KIR2DL5BA0A0G2JPC4 375 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 A0A1W2PPQ1 181 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 A6NDX4 124 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 EREGO14944 169 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 RBFOX2O43251 390 aaKnown RBP eCLIP11.57□□□□□ -0.56
SGCE-202ENST00000415788 TMEM11P17152 192 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 CD24P25063 80 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 ELLP55199 621 aaPredicted RBP11.57□□□□□ -0.56
SGCE-202ENST00000415788 RPL30P62888 115 aaKnown RBP11.57□□□□□ -0.56
SGCE-202ENST00000415788 TMEM14EPQ6UXP3 125 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 KIR2DL5AQ8N109 375 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 RPP25LQ8N5L8 163 aaKnown RBP11.57□□□□□ -0.56
SGCE-202ENST00000415788 FLYWCH2Q96CP2 140 aaKnown RBP11.57□□□□□ -0.56
SGCE-202ENST00000415788 EAF1Q96JC9 268 aaPredicted RBP11.57□□□□□ -0.56
SGCE-202ENST00000415788 FUT9Q9Y231 359 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 MTORP42345 2549 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 NSD1Q96L73 2696 aaPredicted RBP11.57□□□□□ -0.56
SGCE-202ENST00000415788 IGKV1-39P01597 117 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 IGKV1D-39P04432 117 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 RNASE1P07998 156 aaKnown RBP11.57□□□□□ -0.56
SGCE-202ENST00000415788 OR10J1P30954 320 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 LINC00205P59089 165 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 RPL15P61313 204 aaKnown RBP11.57□□□□□ -0.56
SGCE-202ENST00000415788 OR4S2Q8NH73 311 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 TMEM37Q8WXS4 190 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 SNHG12Q9BXW3 62 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 ESM1Q9NQ30 184 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 FKBP11Q9NYL4 201 aa11.57□□□□□ -0.56
SGCE-202ENST00000415788 UBE2L5PA0A1B0GUS4 154 aa11.56□□□□□ -0.56
SGCE-202ENST00000415788 FCGR3BO75015 233 aa11.56□□□□□ -0.56
SGCE-202ENST00000415788 IGKV1-5P01602 117 aa11.56□□□□□ -0.56
SGCE-202ENST00000415788 LY6EQ16553 131 aa11.56□□□□□ -0.56
SGCE-202ENST00000415788 Q8N6K4 173 aa11.56□□□□□ -0.56
SGCE-202ENST00000415788 OSR1Q8TAX0 266 aaPredicted RBP11.56□□□□□ -0.56
SGCE-202ENST00000415788 RBM14Q96PK6 669 aaKnown RBP11.56□□□□□ -0.56
SGCE-202ENST00000415788 C1RLQ9NZP8 487 aa11.56□□□□□ -0.56
SGCE-202ENST00000415788 IGKV1-16P04430 117 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 LGALS7P47929 136 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 TMEM177Q53S58 311 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 SPANXN5Q5MJ07 72 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 OR4F5Q8NH21 305 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 OR4F4Q96R69 305 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 SLC25A33Q9BSK2 321 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 TMEM147Q9BVK8 224 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 TNFRSF19Q9NS68 423 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 RELQ04864 619 aaPredicted RBP11.55□□□□□ -0.56
SGCE-202ENST00000415788 DUX5Q96PT3 197 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 ELOVL1Q9BW60 279 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 NAGKQ9UJ70 344 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 MOB4Q9Y3A3 225 aa11.55□□□□□ -0.56
SGCE-202ENST00000415788 SOX15O60248 233 aa11.54□□□□□ -0.56
SGCE-202ENST00000415788 SCGB1D1O95968 90 aa11.54□□□□□ -0.56
SGCE-202ENST00000415788 HPRT1P00492 218 aa11.54□□□□□ -0.56
SGCE-202ENST00000415788 BRWD1-AS2P59051 145 aa11.54□□□□□ -0.56
SGCE-202ENST00000415788 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
SGCE-202ENST00000415788 MMDQ15546 238 aa11.54□□□□□ -0.56
SGCE-202ENST00000415788 ACSM6Q6P461 480 aa11.54□□□□□ -0.56
SGCE-202ENST00000415788 TMEM219Q86XT9 240 aa11.54□□□□□ -0.56
SGCE-202ENST00000415788 OR10G9Q8NGN4 311 aa11.54□□□□□ -0.56
SGCE-202ENST00000415788 OR10G7Q8NGN6 311 aa11.54□□□□□ -0.56
SGCE-202ENST00000415788 HARBI1Q96MB7 349 aa11.54□□□□□ -0.56
SGCE-202ENST00000415788 NBR2O15453 112 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 PDE6DO43924 150 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 FOXL1Q12952 345 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms