RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SPINK4O60575 86 aa16.76■□□□□ 0.27
AP1S3-205ENST00000415298 SMIM13P0DJ93 91 aa16.76■□□□□ 0.27
AP1S3-205ENST00000415298 FAM120AOSQ5T036 256 aa16.76■□□□□ 0.27
AP1S3-205ENST00000415298 ZNF502Q8TBZ5 544 aa16.76■□□□□ 0.27
AP1S3-205ENST00000415298 Q8TCH9 128 aa16.76■□□□□ 0.27
AP1S3-205ENST00000415298 V9GYV3 84 aa16.76■□□□□ 0.27
AP1S3-205ENST00000415298 ZFYVE26Q68DK2 2539 aa16.76■□□□□ 0.27
AP1S3-205ENST00000415298 HERV-K104P61576 105 aa16.75■□□□□ 0.27
AP1S3-205ENST00000415298 PRRG4Q9BZD6 226 aa16.75■□□□□ 0.27
AP1S3-205ENST00000415298 TMEM133Q9H2Q1 129 aa16.75■□□□□ 0.27
AP1S3-205ENST00000415298 LHFPL6Q9Y693 200 aa16.75■□□□□ 0.27
AP1S3-205ENST00000415298 SLC25A47Q6Q0C1 308 aa16.75■□□□□ 0.27
AP1S3-205ENST00000415298 OR5AS1Q8N127 324 aa16.75■□□□□ 0.27
AP1S3-205ENST00000415298 TRIB1Q96RU8 372 aa16.75■□□□□ 0.27
AP1S3-205ENST00000415298 KCNK17Q96T54 332 aa16.75■□□□□ 0.27
AP1S3-205ENST00000415298 SAP30LQ9HAJ7 183 aa16.75■□□□□ 0.27
AP1S3-205ENST00000415298 DNPH1O43598 174 aa16.74■□□□□ 0.27
AP1S3-205ENST00000415298 CR1LQ2VPA4 569 aa16.74■□□□□ 0.27
AP1S3-205ENST00000415298 RPRMLQ8N4K4 120 aa16.74■□□□□ 0.27
AP1S3-205ENST00000415298 HDHD3Q9BSH5 251 aaPredicted RBP16.74■□□□□ 0.27
AP1S3-205ENST00000415298 POLDIP2Q9Y2S7 368 aa16.74■□□□□ 0.27
AP1S3-205ENST00000415298 A0A1W2PRE2 83 aa16.74■□□□□ 0.27
AP1S3-205ENST00000415298 K7EN84 100 aa16.74■□□□□ 0.27
AP1S3-205ENST00000415298 TXNDC17Q9BRA2 123 aa16.74■□□□□ 0.27
AP1S3-205ENST00000415298 TECRQ9NZ01 308 aaKnown RBP16.74■□□□□ 0.27
AP1S3-205ENST00000415298 DOCK7Q96N67 2140 aa16.74■□□□□ 0.27
AP1S3-205ENST00000415298 IGKV1D-43A0A0B4J1Z2 117 aa16.73■□□□□ 0.27
AP1S3-205ENST00000415298 IGHMP01871 453 aa16.73■□□□□ 0.27
AP1S3-205ENST00000415298 GTSF1Q8WW33 167 aa16.73■□□□□ 0.27
AP1S3-205ENST00000415298 C3orf80F5H4A9 247 aa16.73■□□□□ 0.27
AP1S3-205ENST00000415298 NANOS1Q8WY41 292 aaKnown RBP16.73■□□□□ 0.27
AP1S3-205ENST00000415298 SMIM9A6NGZ8 99 aa16.72■□□□□ 0.27
AP1S3-205ENST00000415298 FGF6P10767 208 aa16.72■□□□□ 0.27
AP1S3-205ENST00000415298 DAP3P51398 398 aaKnown RBP16.72■□□□□ 0.27
AP1S3-205ENST00000415298 FAM162BQ5T6X4 162 aa16.72■□□□□ 0.27
AP1S3-205ENST00000415298 C6orf201Q7Z4U5 140 aa16.72■□□□□ 0.27
AP1S3-205ENST00000415298 PRSS37A4D1T9 235 aa16.72■□□□□ 0.27
AP1S3-205ENST00000415298 FOXI1Q12951 378 aa16.72■□□□□ 0.27
AP1S3-205ENST00000415298 LY96Q9Y6Y9 160 aa16.72■□□□□ 0.27
AP1S3-205ENST00000415298 UBE2L5PA0A1B0GUS4 154 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 PRSS29PA6NIE9 313 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 COX5AP20674 150 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 RNPS1Q15287 305 aaKnown RBP16.71■□□□□ 0.27
AP1S3-205ENST00000415298 DMRTC1Q5HYR2 192 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 OR4X2Q8NGF9 303 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 H1FXQ92522 213 aaKnown RBP16.71■□□□□ 0.27
AP1S3-205ENST00000415298 SHANK1Q9Y566 2161 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 ZNF816-ZNF321PA0A0X1KG74 233 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 IGHV3-9P01782 118 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 CTLA4P16410 223 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 TEPPQ6URK8 271 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 GFRALQ6UXV0 394 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 OR1A1Q9P1Q5 309 aa16.71■□□□□ 0.27
AP1S3-205ENST00000415298 LEPROTL1O95214 131 aa16.7■□□□□ 0.26
AP1S3-205ENST00000415298 MGST1P10620 155 aaKnown RBP16.7■□□□□ 0.26
AP1S3-205ENST00000415298 ZNF121P58317 390 aaPredicted RBP16.7■□□□□ 0.26
AP1S3-205ENST00000415298 OR9G4Q8NGQ1 327 aa16.7■□□□□ 0.26
AP1S3-205ENST00000415298 CXorf1O96002 111 aa16.7■□□□□ 0.26
AP1S3-205ENST00000415298 ANXA2RQ3ZCQ2 193 aa16.7■□□□□ 0.26
AP1S3-205ENST00000415298 SEM1Q6ZVN7 128 aa16.7■□□□□ 0.26
AP1S3-205ENST00000415298 C9orf106Q8NAJ2 232 aa16.7■□□□□ 0.26
AP1S3-205ENST00000415298 OR1L1Q8NH94 360 aa16.7■□□□□ 0.26
AP1S3-205ENST00000415298 IGLV1-36A0A0B4J1U3 117 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 A1L4Q6 167 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 APOMO95445 188 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 TBC1D26Q86UD7 250 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 ZNF837Q96EG3 531 aaPredicted RBP16.69■□□□□ 0.26
AP1S3-205ENST00000415298 PSENENQ9NZ42 101 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 PCNX1Q96RV3 2341 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 NPIPB13A6NJU9 1138 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 NPIPB4C9JG80 1138 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 GAGE13Q4V321 117 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 C1orf162Q8NEQ5 155 aaPredicted RBP16.69■□□□□ 0.26
AP1S3-205ENST00000415298 RDH5Q92781 318 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 MAP1LC3CQ9BXW4 147 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 ONECUT1Q9UBC0 465 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 FAM215AQ9Y5M1 114 aa16.69■□□□□ 0.26
AP1S3-205ENST00000415298 G6PCP35575 357 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 CLRN1P58418 232 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 SLC35B1P78383 322 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 DIAPH2-AS1Q14236 149 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 LINC00173Q6ZV60 143 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 AAED1Q7RTV5 226 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 ATP6V0E2Q8NHE4 81 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 LRRC29Q8WV35 223 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 IGKV3D-15A0A087WSY6 115 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 FOXF2Q12947 444 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 FAM57AQ8TBR7 257 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 TMEM126AQ9H061 195 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 COA3Q9Y2R0 106 aaPredicted RBP16.68■□□□□ 0.26
AP1S3-205ENST00000415298 CFAP46Q8IYW2 2715 aa16.68■□□□□ 0.26
AP1S3-205ENST00000415298 INTS1Q8N201 2190 aaKnown RBP16.68■□□□□ 0.26
AP1S3-205ENST00000415298 OR7C1O76099 320 aaPredicted RBP16.67■□□□□ 0.26
AP1S3-205ENST00000415298 IGHG1P01857 330 aa16.67■□□□□ 0.26
AP1S3-205ENST00000415298 NDUFV3P56181 108 aaKnown RBP16.67■□□□□ 0.26
AP1S3-205ENST00000415298 RPL8P62917 257 aaKnown RBP16.67■□□□□ 0.26
AP1S3-205ENST00000415298 Q6ZS49 121 aa16.67■□□□□ 0.26
AP1S3-205ENST00000415298 MPC1Q9Y5U8 109 aa16.67■□□□□ 0.26
AP1S3-205ENST00000415298 POLEQ07864 2286 aa16.67■□□□□ 0.26
AP1S3-205ENST00000415298 C9JCJ5 164 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms