RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TRBV9A0A0B4J1U6 114 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 IGHV3-35A0A0C4DH35 117 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 A0A0G2JLM5 398 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 CRYM-AS1A6NIL9 109 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 FAM223BA6NKX1 122 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 H3BUA1 57 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 K7EIL1 84 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 BMPR1BO00238 502 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 IGHV3-48P01763 117 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 PRSS2P07478 247 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 AKR1C4P17516 323 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 CTRB1P17538 263 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 NPBWR1P48145 328 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 INPP1P49441 399 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 CCR6P51684 374 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 MFAP2P55001 183 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 SYNJ2BPP57105 145 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 RND3P61587 244 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 RUNX1Q01196 453 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 TWIST1Q15672 202 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 CNPY1Q3B7I2 92 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 DEFB121Q5J5C9 76 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 C9orf66Q5T8R8 295 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 TRIQKQ629K1 86 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 CTRB2Q6GPI1 263 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 C11orf87Q6NUJ2 197 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 SLC25A24Q6NUK1 477 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 ZNF343Q6P1L6 599 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 BTNL8Q6UX41 500 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 CLEC19AQ6UXS0 136 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 FAM223AQ8IWN6 122 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 OR1L8Q8NGR8 309 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 TMEM230Q96A57 120 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 SGK494Q96LW2 274 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 SDHCQ99643 169 aaPredicted RBP3.71□□□□□ -1.82
VPS41-205ENST00000414632 MCRIP2Q9BUT9 160 aaKnown RBP3.71□□□□□ -1.82
VPS41-205ENST00000414632 CSTL1Q9H114 145 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 Q9H8V8 135 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 GSN-AS1Q9NRJ2 163 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 NDUFA4L2Q9NRX3 87 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 PTTG2Q9NZH5 202 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 PEF1Q9UBV8 284 aaKnown RBP3.71□□□□□ -1.82
VPS41-205ENST00000414632 SCP2D1Q9UJQ7 156 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 GPR132Q9UNW8 380 aa3.71□□□□□ -1.82
VPS41-205ENST00000414632 IGHV3OR16-8A0A075B7F1 116 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.7□□□□□ -1.82
VPS41-205ENST00000414632 A0A1B0GVG6 124 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 DUS4LO95620 317 aaKnown RBP3.7□□□□□ -1.82
VPS41-205ENST00000414632 DHFRP00374 187 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 CRYGCP07315 174 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 P0C879 139 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 IL7P13232 177 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 UCP1P25874 307 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 PTBP1P26599 531 aaKnown RBP eCLIP3.7□□□□□ -1.82
VPS41-205ENST00000414632 GPR183P32249 361 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 FAUP35544 74 aaKnown RBP3.7□□□□□ -1.82
VPS41-205ENST00000414632 ETV6P41212 452 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 HOXA1P49639 335 aaPredicted RBP3.7□□□□□ -1.82
VPS41-205ENST00000414632 AP3S2P59780 193 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 SUPT4H1P63272 117 aaKnown RBP3.7□□□□□ -1.82
VPS41-205ENST00000414632 ZNF415Q09FC8 603 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 EGFEM1PQ0D2K5 195 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 TMEM187Q14656 261 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 SURF2Q15527 256 aaPredicted RBP3.7□□□□□ -1.82
VPS41-205ENST00000414632 RPEL1Q2QD12 228 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 ETFRF1Q6IPR1 90 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 SLC25A42Q86VD7 318 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 SGPP2Q8IWX5 399 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 SELENOHQ8IZQ5 122 aaKnown RBP3.7□□□□□ -1.82
VPS41-205ENST00000414632 SLC35G3Q8N808 338 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 GDPD1Q8N9F7 314 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 UBAC2Q8NBM4 344 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 NECAP1Q8NC96 275 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 GLYATL2Q8WU03 294 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 CACNG8Q8WXS5 425 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 LSM10Q969L4 123 aaKnown RBP3.7□□□□□ -1.82
VPS41-205ENST00000414632 EEF1AKMT3Q96AZ1 226 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 PINX1Q96BK5 328 aaKnown RBP3.7□□□□□ -1.82
VPS41-205ENST00000414632 USMG5Q96IX5 58 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 TMEM56Q96MV1 263 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 ATG101Q9BSB4 218 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 TMEM222Q9H0R3 208 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 PLEKHA3Q9HB20 300 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 FAM212BQ9NTI7 297 aaPredicted RBP3.7□□□□□ -1.82
VPS41-205ENST00000414632 TMEM14BQ9NUH8 114 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 SLC2A8Q9NY64 477 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 NDUFA13Q9P0J0 144 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 CACNG5Q9UF02 275 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 PRNDQ9UKY0 176 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 FLVCR2Q9UPI3 526 aa3.7□□□□□ -1.82
VPS41-205ENST00000414632 IZUMO1RA6ND01 250 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 C5orf51A6NDU8 294 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 OR2T8A6NH00 312 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 BRI3O95415 125 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 CDS2O95674 445 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 IFNA17P01571 189 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 SPNP16150 400 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 HIST1H1BP16401 226 aaKnown RBP3.69□□□□□ -1.82
VPS41-205ENST00000414632 ZP3P21754 424 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 HSPE1P61604 102 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms