RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 DYNLRB1Q9NP97 96 aa10.61□□□□□ -0.71
LITAF-203ENST00000413364 SLC25A10Q9UBX3 287 aaPredicted RBP10.61□□□□□ -0.71
LITAF-203ENST00000413364 RPUSD1Q9UJJ7 312 aaKnown RBP10.61□□□□□ -0.71
LITAF-203ENST00000413364 RNF114Q9Y508 228 aa10.61□□□□□ -0.71
LITAF-203ENST00000413364 LINC00312Q9Y6C7 94 aa10.61□□□□□ -0.71
LITAF-203ENST00000413364 NUDT3O95989 172 aa10.61□□□□□ -0.71
LITAF-203ENST00000413364 CD3EP07766 207 aa10.61□□□□□ -0.71
LITAF-203ENST00000413364 SAA2P0DJI9 122 aaPredicted RBP10.61□□□□□ -0.71
LITAF-203ENST00000413364 ERVK-16P61578 105 aa10.61□□□□□ -0.71
LITAF-203ENST00000413364 CD300EQ496F6 205 aaPredicted RBP10.61□□□□□ -0.71
LITAF-203ENST00000413364 ZDHHC16Q969W1 377 aa10.61□□□□□ -0.71
LITAF-203ENST00000413364 CHRDL1Q9BU40 450 aa10.61□□□□□ -0.71
LITAF-203ENST00000413364 WDR61Q9GZS3 305 aaKnown RBP10.61□□□□□ -0.71
LITAF-203ENST00000413364 TANC2Q9HCD6 1990 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 H0YJW9 148 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 EFNB3Q15768 340 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 HLA-DRB5Q30154 266 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 CCDC144NLQ6NUI1 221 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 OR5A1Q8NGJ0 315 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 SGMS2Q8NHU3 365 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 CCL17Q92583 94 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 ADTRPQ96IZ2 230 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 AP1S3Q96PC3 154 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 MS4A5Q9H3V2 200 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 DIDO1Q9BTC0 2240 aaKnown RBP10.6□□□□□ -0.71
LITAF-203ENST00000413364 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.6□□□□□ -0.71
LITAF-203ENST00000413364 FAM90A27PA6NNH2 459 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 PMS2P5A8MQ11 134 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 J3QR89 54 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 CCL21O00585 134 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 TNFRSF13BO14836 293 aaPredicted RBP10.6□□□□□ -0.71
LITAF-203ENST00000413364 TAF15Q92804 592 aaKnown RBP eCLIP10.6□□□□□ -0.71
LITAF-203ENST00000413364 TMEM147Q9BVK8 224 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 ST20Q9HBF5 79 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 NPVFQ9HCQ7 196 aa10.6□□□□□ -0.71
LITAF-203ENST00000413364 IGF2RP11717 2491 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 MUC21A0A0G2JKD1 596 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 MUC21A0A140T8X8 626 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 UBE2L5PA0A1B0GUS4 154 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
LITAF-203ENST00000413364 LINC00869P0C866 280 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 RPL31P62899 125 aaKnown RBP10.59□□□□□ -0.71
LITAF-203ENST00000413364 SPINK9Q5DT21 86 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 MUC21Q5SSG8 566 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 SLC25A48Q6ZT89 311 aaKnown RBP10.59□□□□□ -0.71
LITAF-203ENST00000413364 OR52E5Q8NH55 327 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 OR4A16Q8NH70 328 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 B9A039 149 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 LINC01560Q8TB33 94 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 TMEM140Q9NV12 185 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 TIMM9Q9Y5J7 89 aa10.59□□□□□ -0.71
LITAF-203ENST00000413364 POLEQ07864 2286 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 K7EP34 96 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 PDE6DO43924 150 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 FCN3O75636 299 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 IGLL1P15814 213 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 RELBQ01201 579 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 ZNF726P1Q15940 193 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 PDLIM3Q53GG5 364 aaPredicted RBP10.58□□□□□ -0.72
LITAF-203ENST00000413364 VKORC1L1Q8N0U8 176 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 A0A1W2PS18 150 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 NDUFB3O43676 98 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 HLA-DRB1P01911 266 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 SEC11AP67812 179 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 VWC2Q2TAL6 325 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 TMEM249Q2WGJ8 235 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 LHX4Q969G2 390 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 VSIRQ9H7M9 311 aa10.58□□□□□ -0.72
LITAF-203ENST00000413364 C7orf71A4D174 169 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 TMEM189A5PLL7 270 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 C15orf62A8K5M9 175 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 ZNF207O43670 478 aaKnown RBP10.57□□□□□ -0.72
LITAF-203ENST00000413364 PLAUP00749 431 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 CA2P00918 260 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 MT-ND6P03923 174 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 SSBP2P81877 361 aaPredicted RBP10.57□□□□□ -0.72
LITAF-203ENST00000413364 TMEM200BQ69YZ2 307 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 LYPD2Q6UXB3 125 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 NEIL1Q96FI4 390 aaPredicted RBP10.57□□□□□ -0.72
LITAF-203ENST00000413364 ZNF714Q96N38 554 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 SPATA25Q9BR10 227 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 ROS1P08922 2347 aa10.57□□□□□ -0.72
LITAF-203ENST00000413364 FCN1O00602 326 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 PMCHP20382 165 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 GRNP28799 593 aaKnown RBP10.56□□□□□ -0.72
LITAF-203ENST00000413364 COX19Q49B96 90 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 OR4F5Q8NH21 305 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 NPFFR1Q9GZQ6 430 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 GNB4Q9HAV0 340 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 SLC39A9Q9NUM3 307 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 KAAG1Q9UBP8 84 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.56□□□□□ -0.72
LITAF-203ENST00000413364 TRAV3A0A0B4J244 114 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 CCL3L1P16619 93 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 CBLN1P23435 193 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 VDAC2P45880 294 aaPredicted RBP10.56□□□□□ -0.72
LITAF-203ENST00000413364 ADORA2A-AS1P86434 159 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 POU2AF1Q16633 256 aa10.56□□□□□ -0.72
LITAF-203ENST00000413364 SLC25A34Q6PIV7 304 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms