RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 MDFIQ99750 246 aa9.13□□□□□ -0.95
SNRNP35-202ENST00000412157 PBDC1Q9BVG4 233 aa9.13□□□□□ -0.95
SNRNP35-202ENST00000412157 PRDM13Q9H4Q3 707 aa9.13□□□□□ -0.95
SNRNP35-202ENST00000412157 MRPL36Q9P0J6 103 aaKnown RBP9.13□□□□□ -0.95
SNRNP35-202ENST00000412157 FBXL7Q9UJT9 491 aa9.13□□□□□ -0.95
SNRNP35-202ENST00000412157 VPS13CQ709C8 3753 aa9.13□□□□□ -0.95
SNRNP35-202ENST00000412157 TRAV30A0A087WSZ9 112 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 TRAV1-1A0A0B4J248 108 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 LINC01548A6NM66 108 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 SEC14L6B5MCN3 397 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 G3V318 75 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 HAX1O00165 279 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 AP4M1O00189 453 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 HOXA3O43365 443 aaPredicted RBP9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 GNG7O60262 68 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 CLN5O75503 358 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 YIF1AO95070 293 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 IFNA1P01562 189 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 IGF1P05019 195 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 LINC00869P0C866 280 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 RHOBP62745 196 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 ZNF726P1Q15940 193 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 Q56UQ5 140 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 SPSB3Q6PJ21 355 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 RBMS3Q6XE24 437 aaKnown RBP9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 RPP25LQ8N5L8 163 aaKnown RBP9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 SIGLECL1Q8N7X8 197 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 OR1L4Q8NGR5 311 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 RNF2Q99496 336 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 C19orf24Q9BVV8 132 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 TREM1Q9NP99 234 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 C21orf62Q9NYP8 219 aa9.12□□□□□ -0.95
SNRNP35-202ENST00000412157 IGKV1D-37A0A075B6S9 117 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 H3BUA1 57 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 COX7A2P2O60397 106 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 NDUFB8O95169 186 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 PEA15Q15121 130 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 KLK9Q2XQG4 91 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 TOR2AQ5JU69 321 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 PRIMA1Q86XR5 153 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 IQCF2Q8IXL9 164 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 TMEM86BQ8N661 226 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 VN1R17PQ8TDU5 208 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 RAB24Q969Q5 203 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 FAM210AQ96ND0 272 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 PFDN5Q99471 154 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 MRPL32Q9BYC8 188 aaKnown RBP9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 PRSS22Q9GZN4 317 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 NPFFR1Q9GZQ6 430 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 KLK9Q9UKQ9 250 aa9.11□□□□□ -0.95
SNRNP35-202ENST00000412157 LY6G6DO95868 133 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 IGLC1P0CG04 106 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 GATA2P23769 480 aaPredicted RBP9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 FGF8P55075 233 aaPredicted RBP9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 BLCAPP62952 87 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 RHOGP84095 191 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 ZNF90Q03938 601 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 GUK1Q16774 197 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 C19orf54Q5BKX5 351 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 GCSAMLQ5JQS6 135 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 SSX7Q7RTT5 188 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 NECAP1Q8NC96 275 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 GATAD1Q8WUU5 269 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 EEF1AKMT3Q96AZ1 226 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 NARS2Q96I59 477 aaKnown RBP9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 TXN2Q99757 166 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 EIF5A2Q9GZV4 153 aaKnown RBP9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 TMEM160Q9NX00 188 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 GAR1Q9NY12 217 aaKnown RBP9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 LINC00527Q9UJ94 153 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 ZNF580Q9UK33 172 aa9.1□□□□□ -0.95
SNRNP35-202ENST00000412157 TRBV9A0A0B4J1U6 114 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 ANKRD34BA5PLL1 514 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 FAM223BA6NKX1 122 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 KRBOX1C9JBD0 128 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 HMGB3O15347 200 aaKnown RBP9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 TRGV3P03979 118 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 OR5G3P0C626 314 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 PPT1P50897 306 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 TAS2R45P59539 299 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 DEFA5Q01523 94 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 TIGITQ495A1 244 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 FAM78BQ5VT40 261 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 C10orf113Q5VZT2 155 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 FAM223AQ8IWN6 122 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 TMEM231Q9H6L2 316 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 DOK5Q9P104 306 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 GNG13Q9P2W3 67 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 FUT9Q9Y231 359 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 S4R3C0 116 aa9.09□□□□□ -0.95
SNRNP35-202ENST00000412157 NSD1Q96L73 2696 aaPredicted RBP9.08□□□□□ -0.96
SNRNP35-202ENST00000412157 FN1P02751 2386 aaKnown RBP9.08□□□□□ -0.96
SNRNP35-202ENST00000412157 ELOA3CA0A087WX78 387 aaPredicted RBP9.08□□□□□ -0.96
SNRNP35-202ENST00000412157 RBFOX3A6NFN3 312 aa9.08□□□□□ -0.96
SNRNP35-202ENST00000412157 EIF3GO75821 320 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNRNP35-202ENST00000412157 CXorf1O96002 111 aa9.08□□□□□ -0.96
SNRNP35-202ENST00000412157 TOMM40O96008 361 aa9.08□□□□□ -0.96
SNRNP35-202ENST00000412157 STAG3L2P0CL84 134 aa9.08□□□□□ -0.96
SNRNP35-202ENST00000412157 STAG3L3P0CL85 134 aa9.08□□□□□ -0.96
SNRNP35-202ENST00000412157 ZP3P21754 424 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms