RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 SPINK8P0C7L1 97 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 BHLHA9Q7RTU4 235 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 TIMM21Q9BVV7 248 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 RSPO3Q9BXY4 272 aaPredicted RBP6.19□□□□□ -1.42
PTPN3-203ENST00000412145 PATJQ8NI35 1801 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 MMP23AO75900 390 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 TIMP3P35625 211 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 TAL2Q16559 108 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 HEPN1Q6WQI6 88 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 PRDM6Q9NQX0 595 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 INTS1Q8N201 2190 aaKnown RBP6.19□□□□□ -1.42
PTPN3-203ENST00000412145 SAA1P0DJI8 122 aaPredicted RBP6.19□□□□□ -1.42
PTPN3-203ENST00000412145 GATD1Q8NB37 220 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 SNHG12Q9BXW3 62 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 SCN5AQ14524 2016 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 FAM223BA6NKX1 122 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 IGFBP2P18065 325 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 MDKP21741 143 aaPredicted RBP6.19□□□□□ -1.42
PTPN3-203ENST00000412145 FAM223AQ8IWN6 122 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 PSG8Q9UQ74 426 aa6.19□□□□□ -1.42
PTPN3-203ENST00000412145 ARFGEF1Q9Y6D6 1849 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 FGF16O43320 207 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 DLEU1O43261 78 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 WISP3O95389 354 aaPredicted RBP6.18□□□□□ -1.42
PTPN3-203ENST00000412145 IGKV1D-33P01593 117 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 IGKV1-33P01594 117 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 CD300CQ08708 224 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 ACTL10Q5JWF8 245 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 RAMP1O60894 148 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 HIST1H2BLQ99880 126 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 RPUSD1Q9UJJ7 312 aaKnown RBP6.18□□□□□ -1.42
PTPN3-203ENST00000412145 RFNGQ9Y644 331 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 C12orf77C9JDV5 145 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 MRPL14Q6P1L8 145 aaKnown RBP6.18□□□□□ -1.42
PTPN3-203ENST00000412145 LURAP1LQ8IV03 231 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 UBE2DNLQ8IWF7 75 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 SPXQ9BT56 116 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 EREGO14944 169 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 UMODP07911 640 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 IFITM1P13164 125 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 CCL3L1P16619 93 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 CCL1P22362 96 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 ADMP35318 185 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 ZNF48Q96MX3 618 aaPredicted RBP6.18□□□□□ -1.42
PTPN3-203ENST00000412145 TMEM133Q9H2Q1 129 aa6.18□□□□□ -1.42
PTPN3-203ENST00000412145 CELA2BP08218 269 aaPredicted RBP6.17□□□□□ -1.42
PTPN3-203ENST00000412145 OCIAD2Q56VL3 154 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 ZNRF1Q8ND25 227 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 CTHRC1Q96CG8 243 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 TRAV13-2A0A0B4J235 113 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 RNF166Q96A37 237 aaPredicted RBP6.17□□□□□ -1.42
PTPN3-203ENST00000412145 PAX8Q06710 450 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 LY75O60449 1722 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 CCL4P13236 92 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 AKAP6Q13023 2319 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 REPIN1Q9BWE0 567 aaKnown RBP6.17□□□□□ -1.42
PTPN3-203ENST00000412145 SPTBN1Q01082 2364 aaKnown RBP6.17□□□□□ -1.42
PTPN3-203ENST00000412145 C19orf48Q6RUI8 117 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 WNT2P09544 360 aa6.17□□□□□ -1.42
PTPN3-203ENST00000412145 EP300Q09472 2414 aaPredicted RBP6.17□□□□□ -1.42
PTPN3-203ENST00000412145 WNK3Q9BYP7 1800 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 TRIOBPQ9H2D6 2365 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 YLPM1P49750 1951 aaKnown RBP6.16□□□□□ -1.42
PTPN3-203ENST00000412145 IGHV3-72A0A0B4J1Y9 119 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 IGHV1-24A0A0C4DH33 117 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 REG1AP05451 166 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 ZNF138P52744 262 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 C6orf226Q5I0X4 101 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 ZNF497Q6ZNH5 498 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 HIST3H2BBQ8N257 126 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 DSCR8Q96T75 97 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 ATG2BQ96BY7 2078 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 ZNF236Q9UL36 1845 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 COX6A1P12074 109 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 TCTEX1D4Q5JR98 221 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 TRPT1Q86TN4 253 aaKnown RBP6.16□□□□□ -1.42
PTPN3-203ENST00000412145 C20orf204Q6ZNR8 217 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 GAGE12BA1L429 117 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 IGKV1D-16P01601 117 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 RNF114Q9Y508 228 aa6.16□□□□□ -1.42
PTPN3-203ENST00000412145 TFF3Q07654 80 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 GAGE1Q13065 139 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 IL15RAQ13261 267 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 MIR17HGQ75NE6 70 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 WDR83OSQ9Y284 106 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 RALGAPA2Q2PPJ7 1873 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 LINC01590Q5TEZ4 76 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 FAM19A2Q8N3H0 131 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 MPDZO75970 2070 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 NDUFB8O95169 186 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 EFNB3Q15768 340 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 PARP14Q460N5 1801 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 CLEC19AQ6UXS0 136 aa6.15□□□□□ -1.42
PTPN3-203ENST00000412145 SYS1-DBNDD2H3BUS1 97 aa6.15□□□□□ -1.43
PTPN3-203ENST00000412145 RTBDNQ9BSG5 229 aaPredicted RBP6.15□□□□□ -1.43
PTPN3-203ENST00000412145 C17orf100A8MU93 164 aa6.15□□□□□ -1.43
PTPN3-203ENST00000412145 SIVA1O15304 175 aa6.15□□□□□ -1.43
PTPN3-203ENST00000412145 KIR3DS1Q14943 382 aa6.15□□□□□ -1.43
PTPN3-203ENST00000412145 RPL39P5Q59GN2 51 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms